RNA–Protein interactions for RNA: ENST00000599138.5

VRK3-215, Transcript of vaccinia related kinase 3, humanhuman

TSL 4

Gene VRK3, Length 503 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-215ENST00000599138 DHX8Q14562 1220 aaKnown RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 TMEM132AQ24JP5 1023 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 XKR4Q5GH76 650 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 AXDND1Q5T1B0 1012 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 FOXD4L5Q5VV16 416 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 RRAGBQ5VZM2 374 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 ATL3Q6DD88 541 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 PTCRAQ6ISU1 281 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 ALKAL1Q6UXT8 129 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 ZPBP2Q6X784 338 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 CCDC73Q6ZRK6 1079 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 HAUS6Q7Z4H7 955 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 APBB1IPQ7Z5R6 666 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 SPRYD3Q8NCJ5 442 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 FOXD4L4Q8WXT5 416 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 UHRF1Q96T88 793 aaPredicted RBP10.65□□□□□ -0.7
VRK3-215ENST00000599138 CDT1Q9H211 546 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 PARVGQ9HBI0 331 aa10.65□□□□□ -0.7
VRK3-215ENST00000599138 MYMKA6NI61 221 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 F8W810 466 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
VRK3-215ENST00000599138 TOM1L1O75674 476 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 FAM13AO94988 1023 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 CXCL14O95715 111 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 PIGRP01833 764 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 SOD2P04179 222 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 IL9P15248 144 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 TXLNAP40222 546 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 GRM5P41594 1212 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 OR1G1P47890 313 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 RBM10P98175 930 aaKnown RBP10.64□□□□□ -0.71
VRK3-215ENST00000599138 STRN3Q13033 797 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 TUSC3Q13454 348 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 PTPN14Q15678 1187 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 ZNF568Q3ZCX4 644 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 MPZL3Q6UWV2 235 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 EP400NLQ6ZTU2 488 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 MYCT1Q8N699 235 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 CEP120Q8N960 986 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 SMRP1Q8NCR6 262 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 DNAJC19Q96DA6 116 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 ZBTB45Q96K62 511 aaPredicted RBP10.64□□□□□ -0.71
VRK3-215ENST00000599138 NECAB3Q96P71 396 aaPredicted RBP10.64□□□□□ -0.71
VRK3-215ENST00000599138 RPS6KC1Q96S38 1066 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 ST6GALNAC4Q9H4F1 302 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 CD207Q9UJ71 328 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 GDAQ9Y2T3 454 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 PRG3Q9Y2Y8 225 aaPredicted RBP10.64□□□□□ -0.71
VRK3-215ENST00000599138 ZDHHC9Q9Y397 364 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 TCHHQ07283 1943 aa10.64□□□□□ -0.71
VRK3-215ENST00000599138 MEFVO15553 781 aaPredicted RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 MBTPS2O43462 519 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 TRAK2O60296 914 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 CUTAO60888 179 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 TBCAO75347 108 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 NR1I2O75469 434 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 KRT18P05783 430 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 THP07101 528 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 NDUFV1P49821 464 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 GTF2BQ00403 316 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 MCL1Q07820 350 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 SMAD4Q13485 552 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 BMS1Q14692 1282 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 SMAD2Q15796 467 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 E2F4Q16254 413 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 KIAA0319Q5VV43 1072 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 SHC4Q6S5L8 630 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 SV2BQ7L1I2 683 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 TAS1R1Q7RTX1 841 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 FAM178BQ8IXR5 827 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 GPR65Q8IYL9 337 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 KCNG4Q8TDN1 519 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 AUTS2Q8WXX7 1259 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 DDX12PQ92771 950 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 PPP1R10Q96QC0 940 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 PAAF1Q9BRP4 392 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 HERC2P3Q9BVR0 1158 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 COLEC11Q9BWP8 271 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 STRA6Q9BX79 667 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 HAPLN2Q9GZV7 340 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 CHST7Q9NS84 486 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 RCOR1Q9UKL0 485 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 BARX2Q9UMQ3 279 aaPredicted RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
VRK3-215ENST00000599138 PDCD11Q14690 1871 aaKnown RBP10.63□□□□□ -0.71
VRK3-215ENST00000599138 VWA8A3KMH1 1905 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 SMIM28A0A1B0GU29 152 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.62□□□□□ -0.71
VRK3-215ENST00000599138 FRMD3A2A2Y4 597 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 K7ENM7 598 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 TNFRSF10AO00220 468 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 FAM189A1O60320 539 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 PPP1R37O75864 691 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 KCNE1P15382 129 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 NMT1P30419 496 aaKnown RBP10.62□□□□□ -0.71
VRK3-215ENST00000599138 ABCD1P33897 745 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 STAT6P42226 847 aa10.62□□□□□ -0.71
VRK3-215ENST00000599138 DNM1Q05193 864 aaKnown RBP10.62□□□□□ -0.71
VRK3-215ENST00000599138 HSP90AA2PQ14568 343 aaPredicted RBP10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms