RNA–Protein interactions for RNA: ENST00000598558.5

SHKBP1-217, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-217ENST00000598558 ANKFY1Q9P2R3 1169 aa15.56■□□□□ 0.08
SHKBP1-217ENST00000598558 CACNG4Q9UBN1 327 aa15.56■□□□□ 0.08
SHKBP1-217ENST00000598558 MTCH2Q9Y6C9 303 aa15.56■□□□□ 0.08
SHKBP1-217ENST00000598558 STYXL1Q9Y6J8 313 aa15.56■□□□□ 0.08
SHKBP1-217ENST00000598558 A0A0B4J269 797 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 GOLGA6L4A6NEF3 574 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 F8W810 466 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 CLDN3O15551 220 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 PRPF40AO75400 957 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 RB1P06400 928 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 GALTP07902 379 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 IGFBP4P22692 258 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 TNFSF9P41273 254 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 SLC11A1P49279 550 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 LIG4P49917 911 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 BCAR1P56945 870 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 FAM160A1Q05DH4 1040 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 DSC1Q08554 894 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 STK4Q13043 487 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 SLC10A6Q3KNW5 377 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 FAM26FQ5R3K3 315 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 SPOUT1Q5T280 376 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 COLGALT2Q8IYK4 626 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 RABGGTAQ92696 567 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 BICD1Q96G01 975 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 ZMAT2Q96NC0 199 aaKnown RBP15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 ACCSQ96QU6 501 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 UBN1Q9NPG3 1134 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 PCDHB13Q9Y5F0 798 aa15.55■□□□□ 0.08
SHKBP1-217ENST00000598558 ZMYM2Q9UBW7 1377 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 HNRNPDLO14979 420 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 POU3F3P20264 500 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 PNOCQ13519 176 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 NOLC1Q14978 699 aaKnown RBP eCLIP15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 XKR4Q5GH76 650 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 SLC39A11Q8N1S5 342 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 KIAA0895Q8NCT3 520 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 SLC17A8Q8NDX2 589 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 ZNF507Q8TCN5 953 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 SCFD1Q8WVM8 642 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 P2RX5Q93086 422 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 HVCN1Q96D96 273 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 ZNF558Q96NG5 402 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 PAAF1Q9BRP4 392 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 PLVAPQ9BX97 442 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 MRPL9Q9BYD2 267 aaKnown RBP15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 PCDHGC5Q9Y5F6 944 aa15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 FNDC1Q4ZHG4 1894 aaPredicted RBP15.54■□□□□ 0.08
SHKBP1-217ENST00000598558 TGFB1I1O43294 461 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 ZC3H11AO75152 810 aaKnown RBP eCLIP15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 FGF18O76093 207 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 CSPG5O95196 566 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 RPN1P04843 607 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 FOSL2P15408 326 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 LAG3P18627 525 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 SCP2P22307 547 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 IRS1P35568 1242 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 RNASELQ05823 741 aaKnown RBP15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 GLRA4Q5JXX5 417 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 CRELD2Q6UXH1 353 aaPredicted RBP15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 HACE1Q8IYU2 909 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 URGCPQ8TCY9 931 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 VN1R3Q9BXE9 311 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 KANSL3Q9P2N6 904 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 STXBP5LQ9Y2K9 1186 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 RWDD3Q9Y3V2 267 aa15.53■□□□□ 0.08
SHKBP1-217ENST00000598558 SMIM28A0A1B0GU29 152 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 NRP1O14786 923 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 OGTO15294 1046 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 MATR3P43243 847 aaKnown RBP eCLIP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 ACOT2P49753 483 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 WNT7BP56706 349 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 ERVFC1P60507 584 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 SOX4Q06945 474 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 SPAG1Q07617 926 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 POSTNQ15063 836 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 CCDC85BQ15834 202 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 ENOX2Q16206 610 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 NELFCDQ8IXH7 590 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 POF1BQ8WVV4 589 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 SNX27Q96L92 541 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 ACAP3Q96P50 834 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 PPP1R10Q96QC0 940 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 GAS2L1Q99501 681 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 CBWD1Q9BRT8 395 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 C11orf84Q9BUA3 381 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 MSTO1Q9BUK6 570 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 CCDC94Q9BW85 323 aaPredicted RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 MARCH5Q9NX47 278 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 SPG21Q9NZD8 308 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 CPSF3Q9UKF6 684 aaKnown RBP15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 PCDHB12Q9Y5F1 795 aa15.52■□□□□ 0.08
SHKBP1-217ENST00000598558 TTC26A0AVF1 554 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 LACTBL1A8MY62 500 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 EIF3DO15371 548 aaKnown RBP eCLIP15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 RHOBTB3O94955 611 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 MYL1P05976 194 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 ADRB2P07550 413 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 CLTAP09496 248 aa15.51■□□□□ 0.07
SHKBP1-217ENST00000598558 CXCL8P10145 99 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms