RNA–Protein interactions for RNA: ENST00000597828.5

SOX2-OT-228, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 864 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-228ENST00000597828 SNTG2Q9NY99 539 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 STK39Q9UEW8 545 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 ADAM28Q9UKQ2 775 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 DUSP12Q9UNI6 340 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 FAM186AA6NE01 2351 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 DENND4CQ5VZ89 1909 aa13.4□□□□□ -0.26
SOX2-OT-228ENST00000597828 PTGESO14684 152 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 TGM5O43548 720 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 PI15O43692 258 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 RECQL4O94761 1208 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 KIF4AO95239 1232 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 NPR3P17342 541 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 LIG1P18858 919 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 TDGQ13569 410 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 NBR1Q14596 966 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 ZNF174Q15697 407 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 ECM1Q16610 540 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 RTP2Q5QGT7 225 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 EEF1DP3Q658K8 133 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 PPP4R3CPQ6ZMV5 832 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 GET4Q7L5D6 327 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 HACE1Q8IYU2 909 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 RIN2Q8WYP3 895 aaPredicted RBP13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 WDR6Q9NNW5 1121 aaKnown RBP13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 TUFT1Q9NNX1 390 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 SSX2IPQ9Y2D8 614 aa13.39□□□□□ -0.27
SOX2-OT-228ENST00000597828 OBSL1O75147 1896 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 ZMYM2Q9UBW7 1377 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 NR1I2O75469 434 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 PRKCBP05771 671 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 CFHP08603 1231 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 OR52Z1P0C646 297 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 IGFBP6P24592 240 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 HSP90AA2PQ14568 343 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 USP41Q3LFD5 358 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 ASCL5Q7RTU5 278 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 NOSTRINQ8IVI9 506 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 ZBTB8OSQ8IWT0 167 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 SIX5Q8N196 739 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 MCPH1Q8NEM0 835 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 CCDC113Q9H0I3 377 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 FZD8Q9H461 694 aa13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 PRMT7Q9NVM4 692 aaPredicted RBP13.38□□□□□ -0.27
SOX2-OT-228ENST00000597828 XRCC6P12956 609 aaKnown RBP eCLIP13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 TUSC3Q13454 348 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 PRPF4BQ13523 1007 aaKnown RBP13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 NAB2Q15742 525 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 FAM187BQ17R55 369 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 TMEM132AQ24JP5 1023 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 GLRA4Q5JXX5 417 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 PADI6Q6TGC4 694 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 C8orf76Q96K31 380 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 PRIMPOLQ96LW4 560 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 POLR3CQ9BUI4 534 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 NT5C3AQ9H0P0 336 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 PIDD1Q9HB75 910 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 FBXL21Q9UKT6 434 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 CA14Q9ULX7 337 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 GDAQ9Y2T3 454 aa13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 NUP210Q8TEM1 1887 aaPredicted RBP13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 SF3B1O75533 1304 aaKnown RBP eCLIP13.37□□□□□ -0.27
SOX2-OT-228ENST00000597828 ZFHX2Q9C0A1 2572 aaPredicted RBP13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 SCN1AP35498 2009 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 ARHGEF35A5YM69 484 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 N4BP3O15049 544 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 ADAM12O43184 909 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 ST18O60284 1047 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 TADA2AO75478 443 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 AOC1P19801 751 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 RPA1P27694 616 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 CLCN5P51795 746 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 NTHL1P78549 312 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 TTC38Q5R3I4 469 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 FAM171A1Q5VUB5 890 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 LILRA6Q6PI73 481 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 CEP57Q86XR8 500 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 NACC1Q96RE7 527 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 FNIP2Q9P278 1114 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 IGSF9Q9P2J2 1179 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 FBXW11Q9UKB1 542 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 GTF3C3Q9Y5Q9 886 aa13.36□□□□□ -0.27
SOX2-OT-228ENST00000597828 RALGAPA1Q6GYQ0 2036 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 DCHS1Q96JQ0 3298 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 ZMYND10O75800 440 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 PAPLNO95428 1278 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 CYP11B2P19099 503 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 NAMPTP43490 491 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 NUBP1P53384 320 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 PSMD5Q16401 504 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 MAPK6Q16659 721 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 FRMD5Q7Z6J6 570 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 CEP120Q8N960 986 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 DEPTORQ8TB45 409 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 LNX1Q8TBB1 728 aaPredicted RBP13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 STAMQ92783 540 aa13.35□□□□□ -0.27
SOX2-OT-228ENST00000597828 CLSTN3Q9BQT9 956 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms