RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 CLIC6Q96NY7 704 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 COLEC11Q9BWP8 271 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 CDT1Q9H211 546 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 CD320Q9NPF0 282 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 BARX2Q9UMQ3 279 aaPredicted RBP14.34□□□□□ -0.11
USE1-207ENST00000596136 MYH15Q9Y2K3 1946 aa14.34□□□□□ -0.11
USE1-207ENST00000596136 H0YCG3 227 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 NR1I2O75469 434 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 THP07101 528 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 SRGAP2BP0DMP2 458 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 MCF2P10911 925 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 HOXB8P17481 243 aaPredicted RBP14.33□□□□□ -0.12
USE1-207ENST00000596136 GRM5P41594 1212 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 ZP2Q05996 745 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 TUSC3Q13454 348 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 CLUL1Q15846 466 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 TMEM132AQ24JP5 1023 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 XKR4Q5GH76 650 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 SPECC1Q5M775 1068 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 ANKRD54Q6NXT1 300 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 ZPBP2Q6X784 338 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 ADHFE1Q8IWW8 467 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
USE1-207ENST00000596136 SLC22A17Q8WUG5 538 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 AUTS2Q8WXX7 1259 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 SUSD6Q92537 303 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 FIZ1Q96SL8 496 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 REEP2Q9BRK0 252 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 HERC2P3Q9BVR0 1158 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
USE1-207ENST00000596136 S1PR5Q9H228 398 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 CXCL16Q9H2A7 254 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 CHST7Q9NS84 486 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 STK17AQ9UEE5 414 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 PRG3Q9Y2Y8 225 aaPredicted RBP14.33□□□□□ -0.12
USE1-207ENST00000596136 HCFC2Q9Y5Z7 792 aa14.33□□□□□ -0.12
USE1-207ENST00000596136 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.32□□□□□ -0.12
USE1-207ENST00000596136 TOM1L1O75674 476 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 CACNB1Q02641 598 aaPredicted RBP14.32□□□□□ -0.12
USE1-207ENST00000596136 CEBPZQ03701 1054 aaKnown RBP14.32□□□□□ -0.12
USE1-207ENST00000596136 KIAA0319Q5VV43 1072 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 SYCE2Q6PIF2 218 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 MPZL3Q6UWV2 235 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 TAS1R1Q7RTX1 841 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 HAUS6Q7Z4H7 955 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 GJD3Q8N144 294 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 CASP10Q92851 521 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 PARVGQ9HBI0 331 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 RXFP1Q9HBX9 757 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 SSX2IPQ9Y2D8 614 aa14.32□□□□□ -0.12
USE1-207ENST00000596136 CITO14578 2027 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 F8W810 466 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 PPP6R2O75170 966 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 YEATS4O95619 227 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 C1RP00736 705 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 ZSCAN22P10073 491 aaPredicted RBP14.31□□□□□ -0.12
USE1-207ENST00000596136 DSG1Q02413 1049 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 STRN3Q13033 797 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 ZNF568Q3ZCX4 644 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 PPFIBP1Q86W92 1011 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 CEP120Q8N960 986 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 RASSF8Q8NHQ8 419 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 ZNF396Q96N95 335 aaPredicted RBP14.31□□□□□ -0.12
USE1-207ENST00000596136 KLHL5Q96PQ7 755 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 PPP1R10Q96QC0 940 aaKnown RBP14.31□□□□□ -0.12
USE1-207ENST00000596136 PAAF1Q9BRP4 392 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 GPR62Q9BZJ7 368 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 ST6GALNAC4Q9H4F1 302 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 MRPL17Q9NRX2 175 aaKnown RBP14.31□□□□□ -0.12
USE1-207ENST00000596136 ADAM28Q9UKQ2 775 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
USE1-207ENST00000596136 USP15Q9Y4E8 981 aaPredicted RBP14.31□□□□□ -0.12
USE1-207ENST00000596136 SMIM28A0A1B0GU29 152 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 SPTLC2O15270 562 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 TRAK2O60296 914 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 FAM13AO94988 1023 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 PIGRP01833 764 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 CNPP09543 421 aaKnown RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 ABCD1P33897 745 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 TXLNAP40222 546 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 MCL1Q07820 350 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 DHX8Q14562 1220 aaKnown RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 HSP90AA2PQ14568 343 aaPredicted RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 STK38Q15208 465 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 RRAGBQ5VZM2 374 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 ATL3Q6DD88 541 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 LLGL2Q6P1M3 1020 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 FUT10Q6P4F1 479 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 MYCT1Q8N699 235 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 KHSRPQ92945 711 aaKnown RBP eCLIP14.3□□□□□ -0.12
USE1-207ENST00000596136 ZBTB45Q96K62 511 aaPredicted RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 POP1Q99575 1024 aaKnown RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 CCDC94Q9BW85 323 aaPredicted RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 EMILIN2Q9BXX0 1053 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 TOPORSQ9NS56 1045 aaPredicted RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 TFIP11Q9UBB9 837 aaKnown RBP14.3□□□□□ -0.12
USE1-207ENST00000596136 TBX20Q9UMR3 447 aa14.3□□□□□ -0.12
USE1-207ENST00000596136 A0A087X0B3 334 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms