RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 BICD1Q96G01 975 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 PAGE5Q96GU1 130 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 C7orf25Q9BPX7 421 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 UBN1Q9NPG3 1134 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 AAASQ9NRG9 546 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 KCNG1Q9UIX4 513 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 FAM237AA0A1B0GTK4 181 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 A0A1W2PQ27 194 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 A0A1W2PQ64 194 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 A0A1W2PQD8 194 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
USE1-206ENST00000595101 ALDH7A1P49419 539 aaKnown RBP16.84■□□□□ 0.29
USE1-206ENST00000595101 ZPBP2Q6X784 338 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 MAP4K3Q8IVH8 894 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 COLGALT2Q8IYK4 626 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 TMEM130Q8N3G9 435 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 PAAF1Q9BRP4 392 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 ST6GALNAC4Q9H4F1 302 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 TSHZ2Q9NRE2 1034 aa16.84■□□□□ 0.29
USE1-206ENST00000595101 CIZ1Q9ULV3 898 aaPredicted RBP16.84■□□□□ 0.29
USE1-206ENST00000595101 NRP1O14786 923 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 HNRNPDLO14979 420 aaKnown RBP16.83■□□□□ 0.28
USE1-206ENST00000595101 GCNT3O95395 438 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 GAP43P17677 238 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 GTF2F1P35269 517 aaKnown RBP eCLIP16.83■□□□□ 0.28
USE1-206ENST00000595101 TNFSF9P41273 254 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 SYKP43405 635 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 LIG4P49917 911 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 MCL1Q07820 350 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 DSC1Q08554 894 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 NAB2Q15742 525 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 ADGRD2Q7Z7M1 963 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 VN1R3Q9BXE9 311 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 OLFML3Q9NRN5 406 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 LMCD1Q9NZU5 365 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 KANSL3Q9P2N6 904 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 SEL1LQ9UBV2 794 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 PRG3Q9Y2Y8 225 aaPredicted RBP16.83■□□□□ 0.28
USE1-206ENST00000595101 MYH11P35749 1972 aa16.83■□□□□ 0.28
USE1-206ENST00000595101 H0YCG3 227 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 CLDN3O15551 220 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 PRPF6O94906 941 aaKnown RBP16.82■□□□□ 0.28
USE1-206ENST00000595101 PRR29P0C7W0 189 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 MCF2P10911 925 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 GRM5P41594 1212 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
USE1-206ENST00000595101 AMPD3Q01432 767 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 NOLC1Q14978 699 aaKnown RBP eCLIP16.82■□□□□ 0.28
USE1-206ENST00000595101 TCEAL5Q5H9L2 206 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 CCDC65Q8IXS2 484 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 HACE1Q8IYU2 909 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 CEP57L1Q8IYX8 460 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 ZSWIM2Q8NEG5 633 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 MRPS27Q92552 414 aaKnown RBP16.82■□□□□ 0.28
USE1-206ENST00000595101 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
USE1-206ENST00000595101 FAM189A1O60320 539 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 PIGRP01833 764 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 ADSSP30520 456 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 OR1G1P47890 313 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 PLCB3Q01970 1234 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 SKIV2LQ15477 1246 aaKnown RBP16.82■□□□□ 0.28
USE1-206ENST00000595101 PTPROQ16827 1216 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 CNNM4Q6P4Q7 775 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 IGSF21Q96ID5 467 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 FAM193BQ96PV7 902 aaPredicted RBP16.82■□□□□ 0.28
USE1-206ENST00000595101 RPS6KC1Q96S38 1066 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 CHMP5Q9NZZ3 219 aa16.82■□□□□ 0.28
USE1-206ENST00000595101 RALGAPA2Q2PPJ7 1873 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 CASTOR2A6NHX0 329 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 KLRC4O43908 158 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 GADD45BO75293 160 aaPredicted RBP16.81■□□□□ 0.28
USE1-206ENST00000595101 ZNF202O95125 648 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 ALDH2P05091 517 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 HOXD13P35453 343 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 EHHADHQ08426 723 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 SLC10A6Q3KNW5 377 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 RBM23Q86U06 439 aaKnown RBP16.81■□□□□ 0.28
USE1-206ENST00000595101 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 LRRC27Q9C0I9 530 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 MAGEF1Q9HAY2 307 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 MARCH5Q9NX47 278 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 FAN1Q9Y2M0 1017 aa16.81■□□□□ 0.28
USE1-206ENST00000595101 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 SPAG1Q07617 926 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 GRIK3Q13003 919 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 SNW1Q13573 536 aaKnown RBP16.8■□□□□ 0.28
USE1-206ENST00000595101 L1TD1Q5T7N2 865 aaKnown RBP16.8■□□□□ 0.28
USE1-206ENST00000595101 UNC13DQ70J99 1090 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 TAS1R1Q7RTX1 841 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 MICAL1Q8TDZ2 1067 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 ACAP3Q96P50 834 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 CCDC94Q9BW85 323 aaPredicted RBP16.8■□□□□ 0.28
USE1-206ENST00000595101 TLR9Q9NR96 1032 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 PLXNA4Q9HCM2 1894 aa16.8■□□□□ 0.28
USE1-206ENST00000595101 A0A0B4J269 797 aa16.79■□□□□ 0.28
USE1-206ENST00000595101 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
USE1-206ENST00000595101 PER2O15055 1255 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms