RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 GIT1Q9Y2X7 761 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 PCDHB13Q9Y5F0 798 aa21.45■■□□□ 1.02
LSM4-203ENST00000593829 PVALEFA0A1B0GWK0 134 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 HNRNPDLO14979 420 aaKnown RBP21.44■■□□□ 1.02
LSM4-203ENST00000593829 GCNT3O95395 438 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 MYL1P05976 194 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 AKAP5P24588 427 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 CTNNB1P35222 781 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 LIG4P49917 911 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 SYCP1Q15431 976 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 LRRC55Q6ZSA7 311 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.44■■□□□ 1.02
LSM4-203ENST00000593829 FBXO22Q8NEZ5 403 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 ANKRD7Q92527 254 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 STRA6Q9BX79 667 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 CDT1Q9H211 546 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 CHD7Q9P2D1 2997 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 PYCARDQ9ULZ3 195 aa21.44■■□□□ 1.02
LSM4-203ENST00000593829 PPP1R37O75864 691 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 PIGRP01833 764 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 RB1P06400 928 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 MCF2P10911 925 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ALCAMQ13740 583 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ZBTB33Q86T24 672 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 FMR1NBQ8N0W7 255 aaPredicted RBP21.43■■□□□ 1.02
LSM4-203ENST00000593829 CCDC34Q96HJ3 373 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 CWH43Q9H720 699 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 AAASQ9NRG9 546 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 SNTG2Q9NY99 539 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 KANSL3Q9P2N6 904 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ANKFY1Q9P2R3 1169 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ARL5CA6NH57 179 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 EPOPA6NHQ4 379 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ABLIM1O14639 778 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 GTPBP6O43824 516 aaPredicted RBP21.43■■□□□ 1.02
LSM4-203ENST00000593829 FAM160A1Q05DH4 1040 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 DMTNQ08495 405 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 C17orf53Q8N3J3 647 aaPredicted RBP21.43■■□□□ 1.02
LSM4-203ENST00000593829 ZBTB45Q96K62 511 aaPredicted RBP21.43■■□□□ 1.02
LSM4-203ENST00000593829 GAD1Q99259 594 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 PLVAPQ9BX97 442 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 TBC1D13Q9NVG8 400 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 HCSTQ9UBK5 93 aa21.43■■□□□ 1.02
LSM4-203ENST00000593829 ZMYM2Q9UBW7 1377 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 C5orf67F2Z3F1 127 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 INPPL1O15357 1258 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 CLDN3O15551 220 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 MLH1P40692 756 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 MATR3P43243 847 aaKnown RBP eCLIP21.42■■□□□ 1.02
LSM4-203ENST00000593829 CASP5P51878 434 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 TYRO3Q06418 890 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 SNW1Q13573 536 aaKnown RBP21.42■■□□□ 1.02
LSM4-203ENST00000593829 KANK3Q6NY19 840 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 STXBP4Q6ZWJ1 553 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 ENGASEQ8NFI3 743 aa21.42■■□□□ 1.02
LSM4-203ENST00000593829 GAS2L1Q99501 681 aaPredicted RBP21.42■■□□□ 1.02
LSM4-203ENST00000593829 RFXAPO00287 272 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 CAVIN2O95810 425 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 MYBP10242 640 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 LAG3P18627 525 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 RNASELQ05823 741 aaKnown RBP21.41■■□□□ 1.02
LSM4-203ENST00000593829 MCL1Q07820 350 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 FAM26FQ5R3K3 315 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 MYLIPQ8WY64 445 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 HPS3Q969F9 1004 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 ZFP42Q96MM3 310 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 ACCSQ96QU6 501 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 FGFBP2Q9BYJ0 223 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 EXOC7Q9UPT5 735 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 GDAQ9Y2T3 454 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 PCDHB12Q9Y5F1 795 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 RALGAPA2Q2PPJ7 1873 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 RECQL4O94761 1208 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 HARSP12081 509 aaKnown RBP21.41■■□□□ 1.02
LSM4-203ENST00000593829 GRM5P41594 1212 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 AFF1P51825 1210 aaKnown RBP21.41■■□□□ 1.02
LSM4-203ENST00000593829 EHHADHQ08426 723 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 C11orf84Q9BUA3 381 aaPredicted RBP21.41■■□□□ 1.02
LSM4-203ENST00000593829 KLK14Q9P0G3 267 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 CDH23Q9H251 3354 aa21.41■■□□□ 1.02
LSM4-203ENST00000593829 H3BNC9 293 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 POMCP01189 267 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 COLGALT1Q8NBJ5 622 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 GDPD5Q8WTR4 605 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 P2RX5Q93086 422 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 NLRC5Q86WI3 1866 aa21.4■■□□□ 1.02
LSM4-203ENST00000593829 KLRC4O43908 158 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 KCNA1Q09470 495 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 GPM6BQ13491 265 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 THNSL1Q8IYQ7 743 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 CEP120Q8N960 986 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 FAM193BQ96PV7 902 aaPredicted RBP21.39■■□□□ 1.02
LSM4-203ENST00000593829 RPS6KC1Q96S38 1066 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 GTPBP4Q9BZE4 634 aaKnown RBP21.39■■□□□ 1.02
LSM4-203ENST00000593829 EXOC1Q9NV70 894 aa21.39■■□□□ 1.02
LSM4-203ENST00000593829 RIOK3O14730 519 aaKnown RBP21.39■■□□□ 1.01
LSM4-203ENST00000593829 PRPF6O94906 941 aaKnown RBP21.39■■□□□ 1.01
LSM4-203ENST00000593829 PRR29P0C7W0 189 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 SCNN1GP51170 649 aa21.39■■□□□ 1.01
LSM4-203ENST00000593829 YARSP54577 528 aaKnown RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms