RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 EFEMP2O95967 443 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 PROZP22891 400 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 NCKAP1LP55160 1127 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 GIT2Q14161 759 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 SMRP1Q8NCR6 262 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 AUTS2Q8WXX7 1259 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 ZNF396Q96N95 335 aaPredicted RBP29.9■■■□□ 2.38
SMAD4-213ENST00000591914 GDAQ9Y2T3 454 aa29.9■■■□□ 2.38
SMAD4-213ENST00000591914 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP29.89■■■□□ 2.38
SMAD4-213ENST00000591914 ABLIM1O14639 778 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 TXLNAP40222 546 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 STRN3Q13033 797 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 SMAD2Q15796 467 aaKnown RBP29.89■■■□□ 2.38
SMAD4-213ENST00000591914 ZNF568Q3ZCX4 644 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 CXCL16Q9H2A7 254 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 C5orf42Q9H799 3197 aa29.89■■■□□ 2.38
SMAD4-213ENST00000591914 F8W810 466 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 H0YCG3 227 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 CLASP2O75122 1294 aaKnown RBP29.88■■■□□ 2.37
SMAD4-213ENST00000591914 BRD1O95696 1058 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 SRGAP2BP0DMP2 458 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 GRM5P41594 1212 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 TUSC3Q13454 348 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 STK38Q15208 465 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 PTPN14Q15678 1187 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 NAB2Q15742 525 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 RNF168Q8IYW5 571 aaPredicted RBP29.88■■■□□ 2.37
SMAD4-213ENST00000591914 COLEC11Q9BWP8 271 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 PARVGQ9HBI0 331 aa29.88■■■□□ 2.37
SMAD4-213ENST00000591914 TFIP11Q9UBB9 837 aaKnown RBP29.88■■■□□ 2.37
SMAD4-213ENST00000591914 FAM13AO94988 1023 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 F13A1P00488 732 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 SOD2P04179 222 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 KRT18P05783 430 aaKnown RBP29.87■■■□□ 2.37
SMAD4-213ENST00000591914 THP07101 528 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 MCF2P10911 925 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 CA8P35219 290 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 FOXD4L5Q5VV16 416 aaPredicted RBP29.87■■■□□ 2.37
SMAD4-213ENST00000591914 RRAGBQ5VZM2 374 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 MPZL3Q6UWV2 235 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 HAUS6Q7Z4H7 955 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 SPRYD3Q8NCJ5 442 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 FOXD4L4Q8WXT5 416 aaPredicted RBP29.87■■■□□ 2.37
SMAD4-213ENST00000591914 PRKAG3Q9UGI9 489 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 HCFC2Q9Y5Z7 792 aa29.87■■■□□ 2.37
SMAD4-213ENST00000591914 SPTLC2O15270 562 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 PPP6R2O75170 966 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 TOM1L1O75674 476 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 YEATS4O95619 227 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 SCP2P22307 547 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 PKP1Q13835 747 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 LLGL2Q6P1M3 1020 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 ZPBP2Q6X784 338 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 MYCT1Q8N699 235 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 CEP120Q8N960 986 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 HERC2P3Q9BVR0 1158 aa29.86■■■□□ 2.37
SMAD4-213ENST00000591914 LILRB3O75022 631 aa29.85■■■□□ 2.37
SMAD4-213ENST00000591914 ANKRD54Q6NXT1 300 aa29.85■■■□□ 2.37
SMAD4-213ENST00000591914 ZBTB33Q86T24 672 aa29.85■■■□□ 2.37
SMAD4-213ENST00000591914 TCHPQ9BT92 498 aa29.85■■■□□ 2.37
SMAD4-213ENST00000591914 CCDC94Q9BW85 323 aaPredicted RBP29.85■■■□□ 2.37
SMAD4-213ENST00000591914 CD320Q9NPF0 282 aa29.85■■■□□ 2.37
SMAD4-213ENST00000591914 TBCAO75347 108 aaKnown RBP29.84■■■□□ 2.37
SMAD4-213ENST00000591914 CCDC73Q6ZRK6 1079 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 TAS1R1Q7RTX1 841 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 CASP10Q92851 521 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 ZBTB45Q96K62 511 aaPredicted RBP29.84■■■□□ 2.37
SMAD4-213ENST00000591914 FIZ1Q96SL8 496 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 PAAF1Q9BRP4 392 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 MRPL17Q9NRX2 175 aaKnown RBP29.84■■■□□ 2.37
SMAD4-213ENST00000591914 CACNG4Q9UBN1 327 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 ADAM28Q9UKQ2 775 aa29.84■■■□□ 2.37
SMAD4-213ENST00000591914 A0A087X0B3 334 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 TRAK2O60296 914 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 ZP2Q05996 745 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 HSP90AA2PQ14568 343 aaPredicted RBP29.83■■■□□ 2.37
SMAD4-213ENST00000591914 XKR4Q5GH76 650 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 ALKAL1Q6UXT8 129 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 ADHFE1Q8IWW8 467 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 RABGGTAQ92696 567 aa29.83■■■□□ 2.37
SMAD4-213ENST00000591914 PPP1R10Q96QC0 940 aaKnown RBP29.83■■■□□ 2.37
SMAD4-213ENST00000591914 TOPORSQ9NS56 1045 aaPredicted RBP29.83■■■□□ 2.37
SMAD4-213ENST00000591914 USP15Q9Y4E8 981 aaPredicted RBP29.83■■■□□ 2.37
SMAD4-213ENST00000591914 CASTOR2A6NHX0 329 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 K7ENM7 598 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 URODP06132 367 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 HOXB8P17481 243 aaPredicted RBP29.82■■■□□ 2.36
SMAD4-213ENST00000591914 YARSP54577 528 aaKnown RBP29.82■■■□□ 2.36
SMAD4-213ENST00000591914 OSTNP61366 133 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 NOLC1Q14978 699 aaKnown RBP eCLIP29.82■■■□□ 2.36
SMAD4-213ENST00000591914 FUT10Q6P4F1 479 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 SYCE2Q6PIF2 218 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 GJD3Q8N144 294 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 TMEM87AQ8NBN3 555 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 SLC22A17Q8WUG5 538 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 EMILIN2Q9BXX0 1053 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 GPR62Q9BZJ7 368 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 S1PR5Q9H228 398 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 ZHX3Q9H4I2 956 aa29.82■■■□□ 2.36
SMAD4-213ENST00000591914 CHST7Q9NS84 486 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms