RNA–Protein interactions for RNA: ENST00000590653.5

LINC01140-210, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 1 (best) BASIC

Gene LINC01140, Length 3,315 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-210ENST00000590653 ATF2P15336 505 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 EPHB2P29323 1055 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 TRMT10CQ7L0Y3 403 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 UTP4Q969X6 686 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 NAP1L4Q99733 375 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 SYT11Q9BT88 431 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 PPP1R12CQ9BZL4 782 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 RREB1Q92766 1687 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 K7ENM7 598 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 KRT15P19012 456 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 GBP1P32455 592 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 CTCFP49711 727 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 NT5C2P49902 561 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 IRX1P78414 480 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 CETN1Q12798 172 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ARHGEF18Q6ZSZ5 1173 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 SLF2Q8IX21 1173 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ARHGEF1Q92888 912 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 LENG9Q96B70 501 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 SERPINB12Q96P63 405 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 LRRC37BQ96QE4 947 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 CBWD1Q9BRT8 395 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ROPN1BQ9BZX4 212 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ROPN1Q9HAT0 212 aaPredicted RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 NINJ2Q9NZG7 142 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 USTQ9Y2C2 406 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 STRCP1A6NGW2 1772 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 DPPA5A6NC42 116 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 SMIM24O75264 130 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 KRT5P13647 590 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 TAC1P20366 129 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ATP5DP30049 168 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 RBM5P52756 815 aaKnown RBP eCLIP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 MXRA7P84157 204 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 MFSD5Q6N075 450 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ZNF720Q7Z2F6 126 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 FBXO11Q86XK2 927 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ANKLE1Q8NAG6 615 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 DHX38Q92620 1227 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 KIAA1683Q9H0B3 1180 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 WNT8AQ9H1J5 351 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ANAPC7Q9UJX3 599 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 R3HDM2Q9Y2K5 976 aaKnown RBP11.68□□□□□ -0.54
LINC01140-210ENST00000590653 ROBO1Q9Y6N7 1651 aa11.68□□□□□ -0.54
LINC01140-210ENST00000590653 IRS2Q9Y4H2 1338 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 AP1G2O75843 785 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 SLITRK3O94933 977 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 UNC5CO95185 931 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 GJB6O95452 261 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 ALADP13716 330 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 GRIK3Q13003 919 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 RFX8Q6ZV50 586 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 HERPUD2Q9BSE4 406 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 AMNQ9BXJ7 453 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 ALG13Q9NP73 1137 aaKnown RBP11.67□□□□□ -0.54
LINC01140-210ENST00000590653 KLHL11Q9NVR0 708 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 ZFATQ9P243 1243 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 GAP43P17677 238 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 CALRP27797 417 aaKnown RBP11.67□□□□□ -0.54
LINC01140-210ENST00000590653 IL9RQ01113 521 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 STRN3Q13033 797 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 KIF22Q14807 665 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 ZNF365Q70YC5 407 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 RAB3IPQ96QF0 476 aaPredicted RBP11.67□□□□□ -0.54
LINC01140-210ENST00000590653 TMEM109Q9BVC6 243 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 METTL5Q9NRN9 209 aaKnown RBP11.67□□□□□ -0.54
LINC01140-210ENST00000590653 POLLQ9UGP5 575 aa11.67□□□□□ -0.54
LINC01140-210ENST00000590653 LINGO3P0C6S8 592 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 GM2AP17900 193 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 WDR4P57081 412 aaKnown RBP11.66□□□□□ -0.54
LINC01140-210ENST00000590653 GABPAQ06546 454 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 BLMHQ13867 455 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 CCDC6Q16204 474 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 FAM98CQ17RN3 349 aaKnown RBP11.66□□□□□ -0.54
LINC01140-210ENST00000590653 BMT2Q1RMZ1 405 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 KAZNQ674X7 775 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 C11orf63Q6NUN7 778 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 C1orf186Q6ZWK4 172 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 ASRGL1Q7L266 308 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 CYFIP1Q7L576 1253 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 SNF8Q96H20 258 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 PCDHAC2Q9Y5I4 1007 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 SPDYE5A6NIY4 337 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 G3V3G9 751 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 GAS7O60861 476 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 HLA-DOAP06340 250 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 MAPK4P31152 587 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 TUBP50607 506 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 VAMP7P51809 220 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 OVGP1Q12889 678 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 SIX1Q15475 284 aaPredicted RBP11.66□□□□□ -0.54
LINC01140-210ENST00000590653 CLUL1Q15846 466 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
LINC01140-210ENST00000590653 OLFML3Q9NRN5 406 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms