RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 EPC1Q9H2F5 836 aa19.29■□□□□ 0.68
RETREG3-210ENST00000590541 NXF3Q9H4D5 531 aaKnown RBP19.29■□□□□ 0.68
RETREG3-210ENST00000590541 SMG5Q9UPR3 1016 aaKnown RBP19.29■□□□□ 0.68
RETREG3-210ENST00000590541 CPLX1O14810 134 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 DKC1O60832 514 aaKnown RBP eCLIP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 P4HBP07237 508 aaKnown RBP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 PTENP60484 403 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 CCT2P78371 535 aaKnown RBP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 CREMQ03060 361 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 EMC2Q15006 297 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 PCBP1Q15365 356 aaKnown RBP eCLIP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 AMHR2Q16671 573 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 RSPO2Q6UXX9 243 aaPredicted RBP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 MTSS1LQ765P7 747 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 ITFG1Q8TB96 612 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 TCP11Q8WWU5 503 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 CLSTN3Q9BQT9 956 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 PDRG1Q9NUG6 133 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 ZSCAN32Q9NX65 697 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 CACNG4Q9UBN1 327 aa19.28■□□□□ 0.68
RETREG3-210ENST00000590541 DDX25Q9UHL0 483 aaKnown RBP19.28■□□□□ 0.68
RETREG3-210ENST00000590541 TPRP12270 2363 aaKnown RBP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 PRR5-ARHGAP8B1AHC4 643 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 HNRNPA1P09651 372 aaKnown RBP eCLIP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 AKAP5P24588 427 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 MAGEA9P43362 315 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 ARHGAP8P85298 464 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 LMNB2Q03252 620 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 SSRP1Q08945 709 aaKnown RBP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 NPY5RQ15761 445 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 IFNLR1Q8IU57 520 aaPredicted RBP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 C4orf19Q8IY42 314 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 BLIDQ8IZY5 108 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 CLDN23Q96B33 292 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 PAAF1Q9BRP4 392 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 NCOA5Q9HCD5 579 aaKnown RBP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 XPNPEP1Q9NQW7 623 aa19.27■□□□□ 0.68
RETREG3-210ENST00000590541 CDV3Q9UKY7 258 aaKnown RBP19.27■□□□□ 0.68
RETREG3-210ENST00000590541 DCDC2BA2VCK2 349 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 ZBTB39O15060 712 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 CCL16O15467 120 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 TADA2AO75478 443 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 C8AP07357 584 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 ARF4P18085 180 aaPredicted RBP19.26■□□□□ 0.67
RETREG3-210ENST00000590541 TARSP26639 723 aaKnown RBP19.26■□□□□ 0.67
RETREG3-210ENST00000590541 YWHABP31946 246 aaKnown RBP19.26■□□□□ 0.67
RETREG3-210ENST00000590541 PFKPQ01813 784 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 GRIK3Q13003 919 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 PPM1LQ5SGD2 360 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 TSSK4Q6SA08 328 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 LNX1Q8TBB1 728 aaPredicted RBP19.26■□□□□ 0.67
RETREG3-210ENST00000590541 SECISBP2LQ93073 1101 aaKnown RBP19.26■□□□□ 0.67
RETREG3-210ENST00000590541 MTRQ99707 1265 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 KXD1Q9BQD3 176 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 LXNQ9BS40 222 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 KCNMB3Q9NPA1 279 aa19.26■□□□□ 0.67
RETREG3-210ENST00000590541 SF3B1O75533 1304 aaKnown RBP eCLIP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 INO80B-WBP1J3KQ70 363 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 DEXIO95424 95 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 HOXA9P31269 272 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 MBTD1Q05BQ5 628 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 NCBP1Q09161 790 aaKnown RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 FZD5Q13467 585 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 HSP90AA2PQ14568 343 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 ANKRD1Q15327 319 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 INF2Q27J81 1249 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 ZBTB41Q5SVQ8 909 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 LIN9Q5TKA1 542 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 GALNT17Q6IS24 598 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 CDR2LQ86X02 465 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 DAGLBQ8NCG7 672 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 PIK3R5Q8WYR1 880 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 RTKNQ9BST9 563 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 PHF20Q9BVI0 1012 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 TRIM6Q9C030 488 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 SLKQ9H2G2 1235 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 PARD6AQ9NPB6 346 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 PRMT8Q9NR22 394 aaPredicted RBP19.25■□□□□ 0.67
RETREG3-210ENST00000590541 RGL1Q9NZL6 768 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 KLK14Q9P0G3 267 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 POLIQ9UNA4 740 aa19.25■□□□□ 0.67
RETREG3-210ENST00000590541 ACACBO00763 2458 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 ARID2Q68CP9 1835 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 SHISA7A6NL88 538 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 ADAM12O43184 909 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 B4GALT5O43286 388 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 CDKL5O76039 1030 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 RPS9P46781 194 aaKnown RBP19.24■□□□□ 0.67
RETREG3-210ENST00000590541 POU5F1BQ06416 359 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 MXD4Q14582 209 aaPredicted RBP19.24■□□□□ 0.67
RETREG3-210ENST00000590541 XKR9Q5GH70 373 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 TPRG1Q6ZUI0 275 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 OTUD6AQ7L8S5 288 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 NPAS3Q8IXF0 933 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 HACE1Q8IYU2 909 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 ASAP3Q8TDY4 903 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 HASPINQ8TF76 798 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 FAM20AQ96MK3 541 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 TTPALQ9BTX7 342 aa19.24■□□□□ 0.67
RETREG3-210ENST00000590541 HCFC1R1Q9NWW0 138 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms