RNA–Protein interactions for RNA: ENST00000590020.1

NEDD4L-227, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4L, Length 710 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-227ENST00000590020 PFKFB3Q16875 520 aaPredicted RBP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 CREB3L3Q68CJ9 461 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 IL31Q6EBC2 164 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 TANGO2Q6ICL3 276 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 ZNF687Q8N1G0 1237 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 RIT2Q99578 217 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 LSG1Q9H089 658 aaKnown RBP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 CHRDQ9H2X0 955 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 UBN1Q9NPG3 1134 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 KLK14Q9P0G3 267 aa14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 NAP1L2Q9ULW6 460 aaPredicted RBP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 MRPS17Q9Y2R5 130 aaKnown RBP14.25□□□□□ -0.13
NEDD4L-227ENST00000590020 NRG2O14511 850 aaPredicted RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 XYLBO75191 536 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 PSMD10O75832 226 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 C1RP00736 705 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 ADD1P35611 737 aaKnown RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 LAMTOR4Q0VGL1 99 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 SLC5A9Q2M3M2 681 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 PABPC1LQ4VXU2 614 aaKnown RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 HEATR6Q6AI08 1181 aaKnown RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 SRGAP1Q7Z6B7 1085 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 CDR2LQ86X02 465 aaPredicted RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 GSTCDQ8NEC7 633 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 NXF3Q9H4D5 531 aaKnown RBP14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 LMAN1LQ9HAT1 526 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 RXFP3Q9NSD7 469 aa14.24□□□□□ -0.13
NEDD4L-227ENST00000590020 ASPMQ8IZT6 3477 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 KLF18A0A0U1RQI7 1052 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 C1QTNF9BB2RNN3 333 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 TSPAN1O60635 241 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 LRP3O75074 770 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 ECI2O75521 394 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 ERLIN2O94905 339 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 C1QTNF9P0C862 333 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 CREMQ03060 361 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 ACAP1Q15027 740 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 SF3A2Q15428 464 aaKnown RBP14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 PSMD5Q16401 504 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 AASDHQ4L235 1098 aaPredicted RBP14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 AXDND1Q5T1B0 1012 aaPredicted RBP14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 FAM171A1Q5VUB5 890 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 RNF149Q8NC42 400 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 CNNM3Q8NE01 707 aa14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 LNX1Q8TBB1 728 aaPredicted RBP14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 MRPS23Q9Y3D9 190 aaKnown RBP14.23□□□□□ -0.13
NEDD4L-227ENST00000590020 CASTOR2A6NHX0 329 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 PROS1P07225 676 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 CEBPBP17676 345 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 GAS6Q14393 721 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 HSP90AA2PQ14568 343 aaPredicted RBP14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 PSPC1Q8WXF1 523 aaKnown RBP14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 SLC7A3Q8WY07 619 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 TTPALQ9BTX7 342 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 WRAP73Q9P2S5 460 aaPredicted RBP14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 ZMIZ1Q9ULJ6 1067 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 FAM208BQ5VWN6 2430 aa14.22□□□□□ -0.13
NEDD4L-227ENST00000590020 TICRRQ7Z2Z1 1910 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 COL4A2P08572 1712 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 SF3B1O75533 1304 aaKnown RBP eCLIP14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 EML1O00423 815 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 KIF4AO95239 1232 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 TDP2O95551 362 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 CCR3P51677 355 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 SHC2P98077 582 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 PPP2R5DQ14738 602 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 NECTIN1Q15223 517 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 NOTUMQ6P988 496 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 B3GNT9Q6UX72 402 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 FAM160A2Q8N612 972 aaPredicted RBP14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 RDM1Q8NG50 284 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 FAM3CQ92520 227 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 CEP170P1Q96L14 293 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 JPH2Q9BR39 696 aaPredicted RBP14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 TRIM6Q9C030 488 aaPredicted RBP14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 CSRNP2Q9H175 543 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 BRD9Q9H8M2 597 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 C2orf42Q9NWW7 574 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 PARP2Q9UGN5 583 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 GIT1Q9Y2X7 761 aa14.21□□□□□ -0.13
NEDD4L-227ENST00000590020 SPEGQ15772 3267 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 INO80B-WBP1J3KQ70 363 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 AXIN1O15169 862 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 NPTXRO95502 500 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 RHOP08100 348 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 FCARP24071 287 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 IGFBP6P24592 240 aaPredicted RBP14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 GNA11P29992 359 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 HOXA9P31269 272 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 OR1D2P34982 312 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 CXCL12P48061 93 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 PSMC5P62195 406 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 EXOSC10Q01780 885 aaKnown RBP14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 GRIK3Q13003 919 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 FERMT3Q86UX7 667 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 GPR65Q8IYL9 337 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 TBCKQ8TEA7 893 aa14.2□□□□□ -0.14
NEDD4L-227ENST00000590020 CCDC12Q8WUD4 166 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms