RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 RABGGTBP53611 331 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 KIF23Q02241 960 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 SP140Q13342 867 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 FOXE3Q13461 319 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 VPS72Q15906 364 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 ATP2B3Q16720 1220 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 RRP12Q5JTH9 1297 aaKnown RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 NAIF1Q69YI7 327 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 MIER2Q8N344 545 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 REPS2Q8NFH8 660 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 OR52N2Q8NGI0 321 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 IL17DQ8TAD2 202 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 CASKIN2Q8WXE0 1202 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 HDAC10Q969S8 669 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 CHMP4CQ96CF2 233 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 LSM14BQ9BX40 385 aaKnown RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 ZNF341Q9BYN7 854 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 VPS11Q9H270 941 aa4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 ZNF703Q9H7S9 590 aaPredicted RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 DDX56Q9NY93 547 aaKnown RBP4.71□□□□□ -1.66
HMGN1P30-201ENST00000589286 KLRG2A4D1S0 409 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA12O60330 932 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 GPR32O75388 356 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 AMHP03971 560 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 RAP2AP10114 183 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 CLRN1P58418 232 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 KRTAP10-2P60368 255 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 BMT2Q1RMZ1 405 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 MFSD14BQ5SR56 506 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PPP4R3AQ6IN85 833 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 DRICH1Q6PGQ1 229 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 HTR3DQ70Z44 454 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 RHOT1Q8IXI2 618 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 CCHCR1Q8TD31 782 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 DPF2Q92785 391 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 HOXB13Q92826 284 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 CEP95Q96GE4 821 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 CPEB1Q9BZB8 566 aaKnown RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 LDAHQ9H6V9 325 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 TDP1Q9NUW8 608 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 EIF2B4Q9UI10 523 aaKnown RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 TUBD1Q9UJT1 453 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 AJAP1Q9UKB5 411 aaPredicted RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA9Q9Y5G4 932 aaKnown RBP4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA8Q9Y5G5 932 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA7Q9Y5G6 932 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA6Q9Y5G7 932 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 PCDHGA3Q9Y5H0 932 aa4.7□□□□□ -1.66
HMGN1P30-201ENST00000589286 FZD9O00144 591 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 MATN3O15232 486 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 PDGFRBP09619 1106 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 ALOX15P16050 662 aaPredicted RBP4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 ATP5JP18859 108 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 TNFRSF1AP19438 455 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 GUCY1A2P33402 732 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 NEK2P51955 445 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 ADKP55263 362 aaKnown RBP4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 CREMQ03060 361 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 SEPT2Q15019 361 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 UAP1L1Q3KQV9 507 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 RABL3Q5HYI8 236 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 ATXN7L2Q5T6C5 722 aaPredicted RBP4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 C1QL3Q5VWW1 255 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 AFMIDQ63HM1 303 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 ANKS6Q68DC2 871 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 GPRIN1Q7Z2K8 1008 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 RSPH3Q86UC2 560 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 GGNQ86UU5 652 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 FBXO18Q8NFZ0 1043 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 OR10H5Q8NGA6 315 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 STON2Q8WXE9 905 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 DCLRE1CQ96SD1 692 aaKnown RBP4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 NDC1Q9BTX1 674 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 AASDHPPTQ9NRN7 309 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 SORCS3Q9UPU3 1222 aa4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 LUC7L2Q9Y383 392 aaKnown RBP4.69□□□□□ -1.66
HMGN1P30-201ENST00000589286 CXorf49A8MYA2 514 aaPredicted RBP4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 PLSCR1O15162 318 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 TRIM24O15164 1050 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 ALDH1L1O75891 902 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 SCAF4O95104 1147 aaKnown RBP4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 PEX11BO96011 259 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 C1SP09871 688 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 VCAM1P19320 739 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 DDCP20711 480 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 SLC6A9P48067 706 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 RAP2BP61225 183 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 TUBA3CQ13748 450 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 TOB2Q14106 344 aaPredicted RBP4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 LSM12Q3MHD2 195 aaKnown RBP4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 MIIPQ5JXC2 388 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 TUBA3EQ6PEY2 450 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 USP51Q70EK9 711 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 DRC7Q8IY82 874 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 OR2I1PQ8NGU4 316 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 SLC35B2Q8TB61 432 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 CPT1CQ8TCG5 803 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 ZNF503Q96F45 646 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 MRI1Q9BV20 369 aa4.68□□□□□ -1.66
HMGN1P30-201ENST00000589286 ZNF747Q9BV97 191 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms