RNA–Protein interactions for RNA: ENST00000589064.5

MBD3-205, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 2

Gene MBD3, Length 1,475 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-205ENST00000589064 ZSCAN16Q9H4T2 348 aaPredicted RBP22.79■■□□□ 1.24
MBD3-205ENST00000589064 PTPRHQ9HD43 1115 aa22.79■■□□□ 1.24
MBD3-205ENST00000589064 MRPL17Q9NRX2 175 aaKnown RBP22.79■■□□□ 1.24
MBD3-205ENST00000589064 KCNG1Q9UIX4 513 aa22.79■■□□□ 1.24
MBD3-205ENST00000589064 FBXO2Q9UK22 296 aaPredicted RBP22.79■■□□□ 1.24
MBD3-205ENST00000589064 ZMYM2Q9UBW7 1377 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 THP07101 528 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 APBB1IPQ7Z5R6 666 aaPredicted RBP22.78■■□□□ 1.24
MBD3-205ENST00000589064 ZBTB33Q86T24 672 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 HSCBQ8IWL3 235 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 TMEM161BQ8NDZ6 487 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 RAD54LQ92698 747 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 CLIC6Q96NY7 704 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 KLHL5Q96PQ7 755 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 PAAF1Q9BRP4 392 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 CCSER1Q9C0I3 900 aa22.78■■□□□ 1.24
MBD3-205ENST00000589064 SRPRBQ9Y5M8 271 aaKnown RBP22.78■■□□□ 1.24
MBD3-205ENST00000589064 EFEMP2O95967 443 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 EPCAMP16422 314 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 HOXB8P17481 243 aaPredicted RBP22.77■■□□□ 1.24
MBD3-205ENST00000589064 KLRC2P26717 231 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 SLC22A17Q8WUG5 538 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 USP28Q96RU2 1077 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 TCHPQ9BT92 498 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 HERC2P3Q9BVR0 1158 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 EMILIN2Q9BXX0 1053 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 CDT1Q9H211 546 aa22.77■■□□□ 1.24
MBD3-205ENST00000589064 MUC3AQ02505 3323 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 CASTOR2A6NHX0 329 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 TADA2AO75478 443 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 CNPP09543 421 aaKnown RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 OSTNP61366 133 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 STRN3Q13033 797 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 TUSC3Q13454 348 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 ZNF568Q3ZCX4 644 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 RNF168Q8IYW5 571 aaPredicted RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 CEP120Q8N960 986 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 SUSD6Q92537 303 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 ZBTB45Q96K62 511 aaPredicted RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 POP1Q99575 1024 aaKnown RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 REEP2Q9BRK0 252 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 GPR62Q9BZJ7 368 aa22.76■■□□□ 1.23
MBD3-205ENST00000589064 LARSQ9P2J5 1176 aaKnown RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 DAXXQ9UER7 740 aaPredicted RBP22.76■■□□□ 1.23
MBD3-205ENST00000589064 PI4K2BG5E9Z4 385 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 URODP06132 367 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 MAPTP10636 758 aaKnown RBP22.75■■□□□ 1.23
MBD3-205ENST00000589064 DDIT3P35638 169 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 HSP90AA2PQ14568 343 aaPredicted RBP22.75■■□□□ 1.23
MBD3-205ENST00000589064 SLC39A14Q15043 492 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 NAB2Q15742 525 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 TPRNQ4KMQ1 711 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 KIAA0319Q5VV43 1072 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 KANK3Q6NY19 840 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 FUT10Q6P4F1 479 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 C12orf76Q8N812 135 aaPredicted RBP22.75■■□□□ 1.23
MBD3-205ENST00000589064 B3GALT6Q96L58 329 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 ADAM28Q9UKQ2 775 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 ODF2LQ9ULJ1 636 aa22.75■■□□□ 1.23
MBD3-205ENST00000589064 KRT18P05783 430 aaKnown RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 HSP90AA1P07900 732 aaKnown RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 GRM5P41594 1212 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 GLUD2P49448 558 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 GLRA4Q5JXX5 417 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 FOXD4L5Q5VV16 416 aaPredicted RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 KIAA1841Q6NSI8 718 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 PPFIBP1Q86W92 1011 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 MYCT1Q8N699 235 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 FOXD4L4Q8WXT5 416 aaPredicted RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 LARP4BQ92615 738 aaKnown RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 CCDC94Q9BW85 323 aaPredicted RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 PHF7Q9BWX1 381 aaPredicted RBP22.74■■□□□ 1.23
MBD3-205ENST00000589064 C1QTNF1Q9BXJ1 281 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 CDH22Q9UJ99 828 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 SSX2IPQ9Y2D8 614 aa22.74■■□□□ 1.23
MBD3-205ENST00000589064 ABLIM1O14639 778 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 FAM13AO94988 1023 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 MCF2P10911 925 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 PROZP22891 400 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 MPZL3Q6UWV2 235 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 HAUS6Q7Z4H7 955 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 HASPINQ8TF76 798 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 RPGRIP1Q96KN7 1286 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 ZHX3Q9H4I2 956 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 CHST7Q9NS84 486 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 TFIP11Q9UBB9 837 aaKnown RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 CCDC39Q9UFE4 941 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 HARSP12081 509 aaKnown RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 CLCN4P51793 760 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 YARSP54577 528 aaKnown RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 NCKAP1LP55160 1127 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 DSG1Q02413 1049 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 CBX2Q14781 532 aaPredicted RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 USP41Q3LFD5 358 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 RARS2Q5T160 578 aaKnown RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 SPRYD3Q8NCJ5 442 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 PPP1R10Q96QC0 940 aaKnown RBP22.73■■□□□ 1.23
MBD3-205ENST00000589064 ADAM7Q9H2U9 754 aa22.73■■□□□ 1.23
MBD3-205ENST00000589064 SMIM28A0A1B0GU29 152 aa22.72■■□□□ 1.23
MBD3-205ENST00000589064 TEX28O15482 410 aa22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms