RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 ACAD10Q6JQN1 1059 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 MAEAQ7L5Y9 396 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 TMC3Q7Z5M5 1100 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 VSIG10LQ86VR7 867 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 JAMLQ86YT9 394 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 KSR1Q8IVT5 923 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ARHGEF19Q8IW93 802 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CDAN1Q8IWY9 1227 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 SCYL3Q8IZE3 742 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 C12orf50Q8NA57 414 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 TMEM161BQ8NDZ6 487 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 EPS8L1Q8TE68 723 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 PARD3BQ8TEW8 1205 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 MAGOHBQ96A72 148 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CENPTQ96BT3 561 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF653Q96CK0 615 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ARHGEF26Q96DR7 871 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 FNBP1Q96RU3 617 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CBWD1Q9BRT8 395 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ACAD9Q9H845 621 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 MRPL47Q9HD33 250 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 OSGEPQ9NPF4 335 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 COL20A1Q9P218 1284 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 SLC9A2Q9UBY0 812 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 FBXO40Q9UH90 709 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 AMACRQ9UHK6 382 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 FAM153AQ9UHL3 310 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 CNOT7Q9UIV1 285 aaKnown RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 ZBTB12Q9Y330 459 aaPredicted RBP7.69□□□□□ -1.18
SPIDR-228ENST00000588781 PCDHA3Q9Y5H8 950 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 SCINQ9Y6U3 715 aa7.69□□□□□ -1.18
SPIDR-228ENST00000588781 HNRNPDLO14979 420 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 THAP12O43422 761 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 SGPL1O95470 568 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 ECEL1O95672 775 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 FAM107AO95990 144 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 GAS8O95995 478 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 KRT14P02533 472 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 NUDT17P0C025 328 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CYP11B1P15538 503 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 DSG3P32926 999 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 LSP1P33241 339 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 RFC5P40937 340 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 LIG4P49917 911 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PMS2P54278 862 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 MRPS25P82663 173 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 POU5F1Q01860 360 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 MAP2K1Q02750 393 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 LMNB2Q03252 620 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PTP4A2Q12974 167 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 BYSLQ13895 437 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PSMD6Q15008 389 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PTGISQ16647 500 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CLEC16AQ2KHT3 1053 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 KRT71Q3SY84 523 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TTC31Q49AM3 519 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 C9orf131Q5VYM1 1079 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 SLC30A10Q6XR72 485 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TRMT10CQ7L0Y3 403 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TAOK1Q7L7X3 1001 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 YTHDF3Q7Z739 585 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TAX1BP1Q86VP1 789 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CCDC105Q8IYK2 499 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 OTUD6BQ8N6M0 293 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF280CQ8ND82 737 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CHST13Q8NET6 341 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 DNERQ8NFT8 737 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 IL31RAQ8NI17 732 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CCHCR1Q8TD31 782 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PIK3R5Q8WYR1 880 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 SLCO2A1Q92959 643 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 VCPIP1Q96JH7 1222 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TMEM109Q9BVC6 243 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 NUP85Q9BW27 656 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 TEX13BQ9BXU2 312 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 FOXP3Q9BZS1 431 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 IMPG2Q9BZV3 1241 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 ROPN1BQ9BZX4 212 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 NSRP1Q9H0G5 558 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 DPH5Q9H2P9 285 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PABPC3Q9H361 631 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 CENPHQ9H3R5 247 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 ROPN1Q9HAT0 212 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 RRAGCQ9HB90 399 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 POLD4Q9HCU8 107 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 JPH1Q9HDC5 661 aaPredicted RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 HOMER2Q9NSB8 354 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 HOXC10Q9NYD6 342 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 GABBR1Q9UBS5 961 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 ZNF112Q9UJU3 913 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 NOCTQ9UK39 431 aaKnown RBP7.68□□□□□ -1.18
SPIDR-228ENST00000588781 PCDHB2Q9Y5E7 798 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 LTBP3Q9NS15 1303 aa7.68□□□□□ -1.18
SPIDR-228ENST00000588781 GOLGA6L7A0A1B0GV03 622 aa7.67□□□□□ -1.18
SPIDR-228ENST00000588781 GMNCA6NCL1 334 aa7.67□□□□□ -1.18
SPIDR-228ENST00000588781 ZSCAN5CA6NGD5 496 aaPredicted RBP7.67□□□□□ -1.18
SPIDR-228ENST00000588781 TMEM110-MUSTN1A8MSY1 372 aa7.67□□□□□ -1.18
SPIDR-228ENST00000588781 H0YGN5 161 aa7.67□□□□□ -1.18
SPIDR-228ENST00000588781 RGS16O15492 202 aaPredicted RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms