RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 ALKAL1Q6UXT8 129 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RBM43Q6ZSC3 357 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 USP37Q86T82 979 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 CDR2LQ86X02 465 aaPredicted RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 NT5DC4Q86YG4 428 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 THNSL1Q8IYQ7 743 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ADSSL1Q8N142 457 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 LRRC43Q8N309 656 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 XXYLT1Q8NBI6 393 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 GLIS3Q8NEA6 775 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 CLP1Q92989 425 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 FAM193BQ96PV7 902 aaPredicted RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RPS6KC1Q96S38 1066 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 FGFBP2Q9BYJ0 223 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 PBX4Q9BYU1 374 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RNF39Q9H2S5 420 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 NXF3Q9H4D5 531 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 ASB7Q9H672 318 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RPF1Q9H9Y2 349 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 SLC28A3Q9HAS3 691 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 RC3H2Q9HBD1 1191 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 SLC38A7Q9NVC3 462 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 DMAC2Q9NW81 257 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 HSPBP1Q9NZL4 362 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 PCDH10Q9P2E7 1040 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 CPSF3Q9UKF6 684 aaKnown RBP9.88□□□□□ -0.83
CIRBP-218ENST00000588344 DERAQ9Y315 318 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 HES2Q9Y543 173 aa9.88□□□□□ -0.83
CIRBP-218ENST00000588344 EVPLQ92817 2033 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 LTBP2Q14767 1821 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 ARID2Q68CP9 1835 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 CETN3O15182 167 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 MAPK13O15264 365 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FAM189A1O60320 539 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 EXOC3O60645 756 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 RECQL4O94761 1208 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 IL18RAPO95256 599 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 ALDH2P05091 517 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FGFR1P11362 822 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 HARSP12081 509 aaKnown RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 KCNE1P15382 129 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 LAG3P18627 525 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 IBSPP21815 317 aaPredicted RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 PAX3P23760 479 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 AKAP5P24588 427 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 ALDH7A1P49419 539 aaKnown RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 NLRP12P59046 1061 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FKBP3Q00688 224 aaKnown RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 ENPEPQ07075 957 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 GRIK3Q13003 919 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 CLLU1OSQ5K130 101 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FAM109BQ6ICB4 259 aaPredicted RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FAM117BQ6P1L5 589 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 GPD1LQ8N335 351 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 HELQQ8TDG4 1101 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 ERCC4Q92889 916 aaPredicted RBP9.87□□□□□ -0.83
CIRBP-218ENST00000588344 LPPQ93052 612 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 TIFAQ96CG3 184 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FBXL18Q96ME1 805 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 GAD1Q99259 594 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FAM213AQ9BRX8 229 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 TMEM175Q9BSA9 504 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 APOL6Q9BWW8 343 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 PLVAPQ9BX97 442 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 FRMD4BQ9Y2L6 1034 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 GDAQ9Y2T3 454 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 PCDHB12Q9Y5F1 795 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 TANC1Q9C0D5 1861 aa9.87□□□□□ -0.83
CIRBP-218ENST00000588344 RANBP2P49792 3224 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 TCHHQ07283 1943 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 SMIM28A0A1B0GU29 152 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 TTC26A0AVF1 554 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 GRXCR1A8MXD5 290 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 PPP1R3GB7ZBB8 358 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 BIN1O00499 593 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 NR3C1P04150 777 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 PRKCSHP14314 528 aaPredicted RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 CYP3A5P20815 502 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 CCNE1P24864 410 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 DNAJB2P25686 324 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 RPL9P32969 192 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 MLH1P40692 756 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 ACOT2P49753 483 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 RABGGTBP53611 331 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 OSTNP61366 133 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 ERVK-21P61565 698 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 PPP2R3AQ06190 1150 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 ADAM9Q13443 819 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 ENOX2Q16206 610 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 SLC10A6Q3KNW5 377 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 HABP4Q5JVS0 413 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 SPOUT1Q5T280 376 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 CACTINQ8WUQ7 758 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 P2RX5Q93086 422 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 DDX27Q96GQ7 796 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 UROC1Q96N76 676 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 TGS1Q96RS0 853 aaKnown RBP9.86□□□□□ -0.83
CIRBP-218ENST00000588344 CBWD1Q9BRT8 395 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 MKNK1Q9BUB5 465 aa9.86□□□□□ -0.83
CIRBP-218ENST00000588344 HAPLN2Q9GZV7 340 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms