RNA–Protein interactions for RNA: ENST00000588261.1

HDAC5-207, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-207ENST00000588261 CCDC65Q8IXS2 484 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 LRRC43Q8N309 656 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 FBXL6Q8N531 539 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 RNF169Q8NCN4 708 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 ASAP3Q8TDY4 903 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 NLRP7Q8WX94 980 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 LPPQ93052 612 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 CDCA3Q99618 268 aaPredicted RBP16.35■□□□□ 0.21
HDAC5-207ENST00000588261 APOL5Q9BWW9 433 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 GPRC5CQ9NQ84 441 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 OLFML3Q9NRN5 406 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 DACT1Q9NYF0 836 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 KMT2EQ8IZD2 1858 aa16.35■□□□□ 0.21
HDAC5-207ENST00000588261 MYO10Q9HD67 2058 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 CACNA1HO95180 2353 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 NT5C1B-RDH14C9J2C7 533 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 AFF1P51825 1210 aaKnown RBP16.34■□□□□ 0.21
HDAC5-207ENST00000588261 EFNA5P52803 228 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 SMTNP53814 917 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 PTENP60484 403 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 SIGLEC14Q08ET2 396 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 POSTNQ15063 836 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 ANKRD54Q6NXT1 300 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 UNC13DQ70J99 1090 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 MAEAQ7L5Y9 396 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 RNF149Q8NC42 400 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 PRSS33Q8NF86 280 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 ZNF558Q96NG5 402 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 VN1R3Q9BXE9 311 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 GCOM2Q9BZD3 368 aaPredicted RBP16.34■□□□□ 0.21
HDAC5-207ENST00000588261 ST6GALNAC4Q9H4F1 302 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 IFT122Q9HBG6 1241 aa16.34■□□□□ 0.21
HDAC5-207ENST00000588261 C2orf71A6NGG8 1288 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 ZSCAN20P17040 1043 aaPredicted RBP16.33■□□□□ 0.2
HDAC5-207ENST00000588261 AFMP43652 599 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 ASIC1P78348 528 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 TPRNQ4KMQ1 711 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 LLGL2Q6P1M3 1020 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 DYMQ7RTS9 669 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 ZBTB8OSQ8IWT0 167 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 BSNDQ8WZ55 320 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 PRIMPOLQ96LW4 560 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 NLRP4Q96MN2 994 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 SCLT1Q96NL6 688 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 TRAIPQ9BWF2 469 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 GTPBP4Q9BZE4 634 aaKnown RBP16.33■□□□□ 0.2
HDAC5-207ENST00000588261 MINDY3Q9H8M7 445 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 ARHGAP28Q9P2N2 729 aa16.33■□□□□ 0.2
HDAC5-207ENST00000588261 USP34Q70CQ2 3546 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 NPHP3-ACAD11A0A0J9YXS1 232 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 HOXA2O43364 376 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 EOMESO95936 686 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 SFPQP23246 707 aaKnown RBP eCLIP16.32■□□□□ 0.2
HDAC5-207ENST00000588261 NPTX2P47972 431 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 NCKAP1LP55160 1127 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 BCAR1P56945 870 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 EHHADHQ08426 723 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 RAD51AP2Q09MP3 1159 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 DPYDQ12882 1025 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 CUL4BQ13620 913 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 ALCAMQ13740 583 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 KCNB1Q14721 858 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 IER5LQ5T953 404 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 MYCT1Q8N699 235 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 DEPTORQ8TB45 409 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 AUTS2Q8WXX7 1259 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 STAMQ92783 540 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 CCDC47Q96A33 483 aaKnown RBP16.32■□□□□ 0.2
HDAC5-207ENST00000588261 HVCN1Q96D96 273 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 RPGRIP1Q96KN7 1286 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 TMEM134Q9H6X4 195 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 KMT5AQ9NQR1 393 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 PANK4Q9NVE7 773 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 SPG21Q9NZD8 308 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 HCFC2Q9Y5Z7 792 aa16.32■□□□□ 0.2
HDAC5-207ENST00000588261 LRRIQ4A6NIV6 560 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 TRAK2O60296 914 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 CLASP2O75122 1294 aaKnown RBP16.31■□□□□ 0.2
HDAC5-207ENST00000588261 SMC2O95347 1197 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 SRGAP2CP0DJJ0 459 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 IDEP14735 1019 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 NUBP1P53384 320 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 PEX3P56589 373 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 CACNB1Q02641 598 aaPredicted RBP16.31■□□□□ 0.2
HDAC5-207ENST00000588261 PSMD2Q13200 908 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 FAM187BQ17R55 369 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 UBXN11Q5T124 520 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 PPP4R3CPQ6ZMV5 832 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 MRPL43Q8N983 215 aaKnown RBP16.31■□□□□ 0.2
HDAC5-207ENST00000588261 SPATA20Q8TB22 786 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 ASIC4Q96FT7 647 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 SNX27Q96L92 541 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 GSDMAQ96QA5 445 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 FIZ1Q96SL8 496 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 NRDE2Q9H7Z3 1164 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 ENTPD7Q9NQZ7 604 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 CHST12Q9NRB3 414 aa16.31■□□□□ 0.2
HDAC5-207ENST00000588261 PUF60Q9UHX1 559 aaKnown RBP16.31■□□□□ 0.2
HDAC5-207ENST00000588261 PTPRZ1P23471 2315 aaPredicted RBP16.3■□□□□ 0.2
HDAC5-207ENST00000588261 CCDC169A6NNP5 214 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms