RNA–Protein interactions for RNA: ENST00000587580.1

CHAF1A-205, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 3

Gene CHAF1A, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-205ENST00000587580 SV2BQ7L1I2 683 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 DYMQ7RTS9 669 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 PDILTQ8N807 584 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 CEP120Q8N960 986 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 KCNG4Q8TDN1 519 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 TCHPQ9BT92 498 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 VN1R3Q9BXE9 311 aa25.77■■□□□ 1.72
CHAF1A-205ENST00000587580 FSD2A1L4K1 749 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 PTGESO14684 152 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 TRAK2O60296 914 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 HARSP12081 509 aaKnown RBP25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 PROZP22891 400 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 DNM1Q05193 864 aaKnown RBP25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 PTCRAQ6ISU1 281 aaPredicted RBP25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 UHRF1Q96T88 793 aaPredicted RBP25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 CCDC94Q9BW85 323 aaPredicted RBP25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 CXCL16Q9H2A7 254 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 ANKFY1Q9P2R3 1169 aa25.76■■□□□ 1.71
CHAF1A-205ENST00000587580 VCANP13611 3396 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 C2orf71A6NGG8 1288 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 ABLIM1O14639 778 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 BRD1O95696 1058 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 GLP2RO95838 553 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 CTSAP10619 480 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 MCF2P10911 925 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 GRM5P41594 1212 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 OSTNP61366 133 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 BECN1Q14457 450 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 CLUL1Q15846 466 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 FAM178BQ8IXR5 827 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 MRPL43Q8N983 215 aaKnown RBP25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 AUTS2Q8WXX7 1259 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 DDX12PQ92771 950 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 KCNN1Q92952 543 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 BICD1Q96G01 975 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 ZBTB45Q96K62 511 aaPredicted RBP25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 STK39Q9UEW8 545 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 CFAP45Q9UL16 551 aa25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 BARX2Q9UMQ3 279 aaPredicted RBP25.75■■□□□ 1.71
CHAF1A-205ENST00000587580 MYMKA6NI61 221 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 F8W810 466 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 TOM1L1O75674 476 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 CXCL14O95715 111 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 THP07101 528 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 YARSP54577 528 aaKnown RBP25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 TUSC3Q13454 348 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 NOLC1Q14978 699 aaKnown RBP eCLIP25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 PUS10Q3MIT2 529 aaKnown RBP25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 ZPBP2Q6X784 338 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 VN1R2Q8NFZ6 395 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 NECAB3Q96P71 396 aaPredicted RBP25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 COLEC11Q9BWP8 271 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 CACNG4Q9UBN1 327 aa25.74■■□□□ 1.71
CHAF1A-205ENST00000587580 TRIP11Q15643 1979 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 IL9P15248 144 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 SCP2P22307 547 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 NMT1P30419 496 aaKnown RBP25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 MATR3P43243 847 aaKnown RBP eCLIP25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 ME1P48163 572 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 RBM10P98175 930 aaKnown RBP25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 GLRA4Q5JXX5 417 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 AXDND1Q5T1B0 1012 aaPredicted RBP25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 SHC4Q6S5L8 630 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 SFR1Q86XK3 245 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 FIZ1Q96SL8 496 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 TOPORSQ9NS56 1045 aaPredicted RBP25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 CLEC1BQ9P126 229 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 CD207Q9UJ71 328 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 TBX20Q9UMR3 447 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 ZDHHC9Q9Y397 364 aa25.73■■□□□ 1.71
CHAF1A-205ENST00000587580 GRXCR2A6NFK2 248 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 CASTOR2A6NHX0 329 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 SOD2P04179 222 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 PTPN14Q15678 1187 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 LLGL2Q6P1M3 1020 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 RABGGTAQ92696 567 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 HERC2P3Q9BVR0 1158 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 IRAK3Q9Y616 596 aa25.72■■□□□ 1.71
CHAF1A-205ENST00000587580 HNRNPDLO14979 420 aaKnown RBP25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 CLDN3O15551 220 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 SRGAP2BP0DMP2 458 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 LIG4P49917 911 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 NAB2Q15742 525 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 TMEM87AQ8NBN3 555 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 DNAJC19Q96DA6 116 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 MSLNLQ96KJ4 702 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 ACAP3Q96P50 834 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 PAAF1Q9BRP4 392 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 PCDHA7Q9UN72 937 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 FAM50BQ9Y247 325 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 CITO14578 2027 aa25.71■■□□□ 1.71
CHAF1A-205ENST00000587580 CLASP2O75122 1294 aaKnown RBP25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 URODP06132 367 aa25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 ABCD1P33897 745 aa25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 GTF2BQ00403 316 aa25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 MCL1Q07820 350 aa25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 SMAD4Q13485 552 aaKnown RBP25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 KCNC3Q14003 757 aa25.7■■□□□ 1.7
CHAF1A-205ENST00000587580 HSP90AA2PQ14568 343 aaPredicted RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms