RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 IFNLR1Q8IU57 520 aaPredicted RBP21.49■■□□□ 1.03
TRIM47-204ENST00000587339 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP21.49■■□□□ 1.03
TRIM47-204ENST00000587339 RAB20Q9NX57 234 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 MYO1AQ9UBC5 1043 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TRIM10Q9UDY6 481 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 TFR2Q9UP52 801 aa21.49■■□□□ 1.03
TRIM47-204ENST00000587339 RBAK-RBAKDNI3L0D1 243 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 B4GALT5O43286 388 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 GFPT2O94808 682 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 MYL3P08590 195 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 IQCF3P0C7M6 154 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 GPC3P51654 580 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 BEX3Q00994 111 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 PRKCZQ05513 592 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 MFSD10Q14728 455 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 SLC18A3Q16572 532 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 SEZ6Q53EL9 994 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF569Q5MCW4 686 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 MPZL3Q6UWV2 235 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 ARHGEF19Q8IW93 802 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 KIAA0319LQ8IZA0 1049 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 TAS1R2Q8TE23 839 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 NLRP7Q8WX94 980 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 SEMA4DQ92854 862 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 SCLT1Q96NL6 688 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 GPR88Q9GZN0 384 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 ADAMTS1Q9UHI8 967 aa21.48■■□□□ 1.03
TRIM47-204ENST00000587339 RCCD1A6NED2 376 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ABLIM1O14639 778 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 OGTO15294 1046 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ZEB2O60315 1214 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 FAM189A1O60320 539 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 EVI5O60447 810 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 CCDC172P0C7W6 258 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 PROZP22891 400 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 WNT7BP56706 349 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 SP3Q02447 781 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 KIF22Q14807 665 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 FSCN1Q16658 493 aaKnown RBP21.47■■□□□ 1.03
TRIM47-204ENST00000587339 TRPV1Q8NER1 839 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF516Q92618 1163 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 VTI1AQ96AJ9 217 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 TSGA10Q9BZW7 698 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 LACRTQ9GZZ8 138 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 PTPRHQ9HD43 1115 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 DUSP11O75319 330 aaKnown RBP21.47■■□□□ 1.03
TRIM47-204ENST00000587339 CYBAP13498 195 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 MAGEA1P43355 309 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 FAM187BQ17R55 369 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF568Q3ZCX4 644 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 LMBRD2Q68DH5 695 aaPredicted RBP21.47■■□□□ 1.03
TRIM47-204ENST00000587339 C15orf39Q6ZRI6 1047 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ZNF571Q7Z3V5 609 aaPredicted RBP21.47■■□□□ 1.03
TRIM47-204ENST00000587339 MYRIPQ8NFW9 859 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 LUC7LQ9NQ29 371 aaKnown RBP21.47■■□□□ 1.03
TRIM47-204ENST00000587339 TNFSF13BQ9Y275 285 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 ZSWIM8A7E2V4 1837 aa21.47■■□□□ 1.03
TRIM47-204ENST00000587339 A0A087X0T9 212 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 CSDE1O75534 798 aaKnown RBP21.46■■□□□ 1.03
TRIM47-204ENST00000587339 FAM228BP0C875 321 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 TNFSF9P41273 254 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 PSEN2P49810 448 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 ZACNQ401N2 412 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 VPS36Q86VN1 386 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 PPM1KQ8N3J5 372 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 TXLNBQ8N3L3 684 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 KATNAL1Q9BW62 490 aa21.46■■□□□ 1.03
TRIM47-204ENST00000587339 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.46■■□□□ 1.03
TRIM47-204ENST00000587339 HAS3O00219 553 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 ZNF410Q86VK4 478 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 BRSK2Q8IWQ3 736 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 NT5C1BQ96P26 610 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 CNTNAP2Q9UHC6 1331 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 PTPRJQ12913 1337 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 FOXN3O00409 490 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-204ENST00000587339 C6orf222P0C671 652 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-204ENST00000587339 ANXA13P27216 316 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 APLP1P51693 650 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 CDR2LQ86X02 465 aaPredicted RBP21.45■■□□□ 1.02
TRIM47-204ENST00000587339 PPP1R13LQ8WUF5 828 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 CGRRF1Q99675 332 aa21.45■■□□□ 1.02
TRIM47-204ENST00000587339 CPSF3Q9UKF6 684 aaKnown RBP21.45■■□□□ 1.02
TRIM47-204ENST00000587339 UQCRHLA0A096LP55 91 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 MBLAC1A4D2B0 266 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-204ENST00000587339 C4BPAP04003 597 aaKnown RBP21.44■■□□□ 1.02
TRIM47-204ENST00000587339 UQCRHP07919 91 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 MFAP3P55082 362 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 PURAQ00577 322 aaKnown RBP21.44■■□□□ 1.02
TRIM47-204ENST00000587339 BIRC3Q13489 604 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 AMHR2Q16671 573 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 EEF1DP3Q658K8 133 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 THNSL1Q8IYQ7 743 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 SLC35F6Q8N357 371 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 FAM84AQ96KN4 292 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 FAM49AQ9H0Q0 323 aaPredicted RBP21.44■■□□□ 1.02
TRIM47-204ENST00000587339 DUSP10Q9Y6W6 482 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 KAT6AQ92794 2004 aa21.44■■□□□ 1.02
TRIM47-204ENST00000587339 SMIM35A0A1B0GVV1 85 aa21.43■■□□□ 1.02
TRIM47-204ENST00000587339 ZC3H11AO75152 810 aaKnown RBP eCLIP21.43■■□□□ 1.02
TRIM47-204ENST00000587339 URI1O94763 535 aaPredicted RBP21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms