RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 USP11P51784 963 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 NLRP12P59046 1061 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 DHX8Q14562 1220 aaKnown RBP8.65□□□□□ -1.02
VMP1-204ENST00000587259 POSTNQ15063 836 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 ZNF174Q15697 407 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 INF2Q27J81 1249 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 ODR4Q5SWX8 454 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 PLA2G4FQ68DD2 849 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 RASSF8Q8NHQ8 419 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 SLC22A17Q8WUG5 538 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 CLIC6Q96NY7 704 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 PANK2Q9BZ23 570 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 CSRNP2Q9H175 543 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 DISC1Q9NRI5 854 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 TBC1D22BQ9NU19 505 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 TBC1D13Q9NVG8 400 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 RMND1Q9NWS8 449 aa8.65□□□□□ -1.02
VMP1-204ENST00000587259 WDR87Q6ZQQ6 2873 aa8.65□□□□□ -1.03
VMP1-204ENST00000587259 DCHS1Q96JQ0 3298 aa8.65□□□□□ -1.03
VMP1-204ENST00000587259 WDR64B1ANS9 1081 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 PROB1E7EW31 1015 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 C2CD2LO14523 706 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 MAGEB2O15479 319 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 HOXA2O43364 376 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 N4BP1O75113 896 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 DDHD2O94830 711 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 STBD1O95210 358 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 TDP2O95551 362 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 EOMESO95936 686 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 GALTP07902 379 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 UBA7P41226 1012 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 NBL1P41271 181 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 MTHFRP42898 656 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 PHKA2P46019 1235 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 ITIH3Q06033 890 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 TBC1D8BQ0IIM8 1120 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 CALCRLQ16602 461 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 LETM2Q2VYF4 491 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 EARS2Q5JPH6 523 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 NT5DC1Q5TFE4 455 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 TWF2Q6IBS0 349 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 KIAA1841Q6NSI8 718 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 ADGRD1Q6QNK2 874 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 TAS1R1Q7RTX1 841 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 CABP7Q86V35 215 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 RHPN2Q8IUC4 686 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 SMAP1Q8IYB5 467 aaPredicted RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 UBALD2Q8IYN6 164 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 ADSSL1Q8N142 457 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 ZNF454Q8N9F8 522 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 TBCKQ8TEA7 893 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 SMARCE1Q969G3 411 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 DDX27Q96GQ7 796 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 TMEM169Q96HH4 297 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 IGSF21Q96ID5 467 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 NLRP4Q96MN2 994 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 GSDMAQ96QA5 445 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 CEP89Q96ST8 783 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 CCSER1Q9C0I3 900 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 LRRC27Q9C0I9 530 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 SEPT9Q9UHD8 586 aaPredicted RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 PIN4Q9Y237 131 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 FAM186AA6NE01 2351 aa8.64□□□□□ -1.03
VMP1-204ENST00000587259 MYH9P35579 1960 aaKnown RBP8.64□□□□□ -1.03
VMP1-204ENST00000587259 IKBKBO14920 756 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 TBX3O15119 743 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 ACTN4O43707 911 aaKnown RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 GAS7O60861 476 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 OFD1O75665 1012 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 POMCP01189 267 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CFHP08603 1231 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CNPP09543 421 aaKnown RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 SPATA31D3P0C874 917 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CTSAP10619 480 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 TMOD1P28289 359 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CIITAP33076 1130 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 PPP1R2P41236 205 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 STAT6P42226 847 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 SETQ01105 290 aaPredicted RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 AMPD3Q01432 767 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 RNASELQ05823 741 aaKnown RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 PDIA5Q14554 519 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 TARBP2Q15633 366 aaKnown RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 PTPN14Q15678 1187 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 NOMO2Q5JPE7 1267 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 ATAT1Q5SQI0 421 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 LRCH2Q5VUJ6 765 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 SARM1Q6SZW1 724 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 SPATA31D4Q6ZUB0 917 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 DDX53Q86TM3 631 aaKnown RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 SLFN12Q8IYM2 578 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 ZDHHC14Q8IZN3 488 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 SIX5Q8N196 739 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 KCTD17Q8N5Z5 321 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 MLKLQ8NB16 471 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 RIN2Q8WYP3 895 aaPredicted RBP8.63□□□□□ -1.03
VMP1-204ENST00000587259 RABGGTAQ92696 567 aa8.63□□□□□ -1.03
VMP1-204ENST00000587259 CALML4Q96GE6 196 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms