RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 ANK1P16157 1881 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 AKAP3O75969 853 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 EOMESO95936 686 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 FGBP02675 491 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 CLTAP09496 248 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 STAG3L1P0CL83 205 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 NCAPHQ15003 741 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 SNRNP35Q16560 246 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 TMEM240Q5SV17 173 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 ZBTB41Q5SVQ8 909 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 ZNF365Q70YC5 407 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 DHX40Q8IX18 779 aaKnown RBP18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 AOPEPQ8N6M6 819 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 ZSWIM2Q8NEG5 633 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 FAM213AQ9BRX8 229 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 THAP9Q9H5L6 903 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 CBX8Q9HC52 389 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 TMEM161AQ9NX61 479 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 NFE2L3Q9Y4A8 694 aa18.48■□□□□ 0.55
PRKCSH-203ENST00000586486 ZNF233A6NK53 670 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 PSMC2P35998 433 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 TNFSF9P41273 254 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 MAGEA10P43363 369 aaPredicted RBP18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 CASP4P49662 377 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 ACOT2P49753 483 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 TPD52L1Q16890 204 aaPredicted RBP18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 CEP135Q66GS9 1140 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 FILIP1Q7Z7B0 1213 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 CBWD2Q8IUF1 395 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 CRIPAKQ8N1N5 446 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 PGBD4Q96DM1 585 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 ACAP3Q96P50 834 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.47■□□□□ 0.555e-18■■■□□ 19
PRKCSH-203ENST00000586486 SRRTQ9BXP5 876 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 HES2Q9Y543 173 aa18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 PDCD11Q14690 1871 aaKnown RBP18.47■□□□□ 0.55
PRKCSH-203ENST00000586486 PTPRSQ13332 1948 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 GOLGA8IPA6NC78 632 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 GOLGA8JA6NMD2 632 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 SMTNL1A8MU46 457 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 GNA14O95837 355 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 WDR5P61964 334 aaKnown RBP18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 ENPEPQ07075 957 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 ENOX2Q16206 610 aaKnown RBP18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 SEZ6Q53EL9 994 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 NPAS4Q8IUM7 802 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 BRSK2Q8IWQ3 736 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 TMEM192Q8IY95 271 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 EEF2KMTQ96G04 330 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 UBN1Q9NPG3 1134 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 TOPORSQ9NS56 1045 aaPredicted RBP18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 SNTG2Q9NY99 539 aa18.46■□□□□ 0.55
PRKCSH-203ENST00000586486 RECQL4O94761 1208 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 ADRB2P07550 413 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 EPB41P11171 864 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 ITGA4P13612 1032 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 MARSP56192 900 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 MCCD1P59942 119 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 OSTNP61366 133 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 CDKAL1Q5VV42 579 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 AGMOQ6ZNB7 445 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 OTOP2Q7RTS6 562 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 FAM186BQ8IYM0 893 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 HERVK_113Q902F9 699 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 BORCS6Q96GS4 357 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 MFSD14AQ96MC6 490 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 RNF39Q9H2S5 420 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 RPF1Q9H9Y2 349 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 PLEKHA5Q9HAU0 1116 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 RBAKQ9NYW8 714 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 GIT1Q9Y2X7 761 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 TNRC18O15417 2968 aaPredicted RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 BECN2A8MW95 431 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 INPPL1O15357 1258 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 AMHP03971 560 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 CXCL8P10145 99 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 YARSP54577 528 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 CYP24A1Q07973 514 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 INTS8Q75QN2 995 aaKnown RBP18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 IRF2BP1Q8IU81 584 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 FAM114A1Q8IWE2 563 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 RSPH1Q8WYR4 309 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 SNX27Q96L92 541 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 HSD3B7Q9H2F3 369 aa18.45■□□□□ 0.54
PRKCSH-203ENST00000586486 TTC26A0AVF1 554 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 MEFVO15553 781 aaPredicted RBP18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 CAPN15O75808 1086 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 IL18RAPO95256 599 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 AKAP5P24588 427 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 PSMD6Q15008 389 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 SLC10A6Q3KNW5 377 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 XKR4Q5GH76 650 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 RASIP1Q5U651 963 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 FRMD5Q7Z6J6 570 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 CD302Q8IX05 232 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 RDH13Q8NBN7 331 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 APOL6Q9BWW8 343 aa18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 MTIF3Q9H2K0 278 aaKnown RBP18.44■□□□□ 0.54
PRKCSH-203ENST00000586486 RSAD1Q9HA92 442 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms