RNA–Protein interactions for RNA: ENST00000586385.5

BRCA1-225, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 781 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-225ENST00000586385 PARM1Q6UWI2 310 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 NFKBIZQ9BYH8 718 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 GPRC5CQ9NQ84 441 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.21□□□□□ -0.29
BRCA1-225ENST00000586385 DPP7Q9UHL4 492 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 FBXW11Q9UKB1 542 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 TPCN1Q9ULQ1 816 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 DMXL1Q9Y485 3027 aa13.21□□□□□ -0.29
BRCA1-225ENST00000586385 MED19A0JLT2 244 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-225ENST00000586385 KIF4AO95239 1232 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 EDN1P05305 212 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 FDPSP14324 419 aaKnown RBP13.2□□□□□ -0.3
BRCA1-225ENST00000586385 RARRES1P49788 294 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 GPC5P78333 572 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 GRIK3Q13003 919 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 TFDP1Q14186 410 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 NAB2Q15742 525 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 SLC27A1Q6PCB7 646 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 DCLRE1AQ6PJP8 1040 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 POTEHQ6S545 545 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 GRASPQ7Z6J2 395 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-225ENST00000586385 PJA1Q8NG27 643 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 LNX1Q8TBB1 728 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-225ENST00000586385 HASPINQ8TF76 798 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 POLR3FQ9H1D9 316 aaPredicted RBP13.2□□□□□ -0.3
BRCA1-225ENST00000586385 SEMA4AQ9H3S1 761 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 PIDD1Q9HB75 910 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 ANKEF1Q9NU02 776 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 PDRG1Q9NUG6 133 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 SIT1Q9Y3P8 196 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 ARID2Q68CP9 1835 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 DOCK6Q96HP0 2047 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 ZMYM2Q9UBW7 1377 aa13.2□□□□□ -0.3
BRCA1-225ENST00000586385 CASTOR2A6NHX0 329 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 EPB41L2O43491 1005 aaKnown RBP13.19□□□□□ -0.3
BRCA1-225ENST00000586385 PFKFB2O60825 505 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 DGAT1O75907 488 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 FSHRP23945 695 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 STARD6P59095 220 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-225ENST00000586385 ELMSAN1Q6PJG2 1045 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 CPLX2Q6PUV4 134 aaKnown RBP13.19□□□□□ -0.3
BRCA1-225ENST00000586385 C1orf210Q8IVY1 113 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 SLFN12Q8IYM2 578 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 KIAA2013Q8IYS2 634 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 DCLK2Q8N568 766 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 SUMF1Q8NBK3 374 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 ITFG1Q8TB96 612 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 KCNG4Q8TDN1 519 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 PIGOQ8TEQ8 1089 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 PIK3R5Q8WYR1 880 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 BSNDQ8WZ55 320 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
BRCA1-225ENST00000586385 PARP2Q9UGN5 583 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 USP20Q9Y2K6 914 aa13.19□□□□□ -0.3
BRCA1-225ENST00000586385 MTF2Q9Y483 593 aaPredicted RBP13.19□□□□□ -0.3
BRCA1-225ENST00000586385 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 CEP250Q9BV73 2442 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 NR1I2O75469 434 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 TADA2AO75478 443 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 SPATA31C1P0DKV0 1188 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 TUSC3Q13454 348 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 CDCA2Q69YH5 1023 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-225ENST00000586385 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 RSPO2Q6UXX9 243 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-225ENST00000586385 PPP4R3CPQ6ZMV5 832 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 FGF13Q92913 245 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 MTMR9Q96QG7 549 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 NAP1L4Q99733 375 aaKnown RBP13.18□□□□□ -0.3
BRCA1-225ENST00000586385 TRIM6Q9C030 488 aaPredicted RBP13.18□□□□□ -0.3
BRCA1-225ENST00000586385 FZD8Q9H461 694 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 PDZD7Q9H5P4 517 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 CACNA1IQ9P0X4 2223 aa13.18□□□□□ -0.3
BRCA1-225ENST00000586385 SF3B1O75533 1304 aaKnown RBP eCLIP13.17□□□□□ -0.31e-6■■■■■ 112.6
BRCA1-225ENST00000586385 SHISA7A6NL88 538 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 CCL16O15467 120 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 MARCH6O60337 910 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 USO1O60763 962 aaKnown RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 CDKL5O76039 1030 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 HNRNPA1P09651 372 aaKnown RBP eCLIP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 NCBP1Q09161 790 aaKnown RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 SNW1Q13573 536 aaKnown RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 PSMD5Q16401 504 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 FAM171A1Q5VUB5 890 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 EEF1DP3Q658K8 133 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 MAEAQ7L5Y9 396 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 TTPALQ9BTX7 342 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 TMEM60Q9H2L4 133 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 TTC12Q9H892 705 aaPredicted RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 HCFC1R1Q9NWW0 138 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 SNTG2Q9NY99 539 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 ORC3Q9UBD5 711 aaPredicted RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 PCDHA12Q9UN75 941 aa13.17□□□□□ -0.3
BRCA1-225ENST00000586385 ZFP37Q9Y6Q3 630 aaPredicted RBP13.17□□□□□ -0.3
BRCA1-225ENST00000586385 LRRIQ4A6NIV6 560 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 RECQL4O94761 1208 aa13.16□□□□□ -0.3
BRCA1-225ENST00000586385 BAG4O95429 457 aaKnown RBP13.16□□□□□ -0.3
BRCA1-225ENST00000586385 LARGE1O95461 756 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms