RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 CLEC17AQ6ZS10 378 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 CEP57L1Q8IYX8 460 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 MYCT1Q8N699 235 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 FSIP1Q8NA03 581 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 EHBP1Q8NDI1 1231 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 TMEM161BQ8NDZ6 487 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 RAD9AQ99638 391 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 C7orf25Q9BPX7 421 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 KIFC3Q9BVG8 833 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 PBX4Q9BYU1 374 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 TRIM9Q9C026 710 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 ST6GALNAC4Q9H4F1 302 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 POLD4Q9HCU8 107 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 OLFML3Q9NRN5 406 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 TMEM161AQ9NX61 479 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 INSL6Q9Y581 213 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 PCDHB7Q9Y5E2 793 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 GBF1Q92538 1859 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 SFI1A8K8P3 1242 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 GRXCR1A8MXD5 290 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 SOX1O00570 391 aaPredicted RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 N4BP3O15049 544 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 SLC16A4O15374 487 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 DGKIO75912 1065 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 PRKCBP05771 671 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 FXR1P51114 621 aaKnown RBP eCLIP8.81□□□□□ -1
SMAD4-204ENST00000586253 NDUFA8P51970 172 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 PRPF4BQ13523 1007 aaKnown RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 DYMQ7RTS9 669 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 APBB1IPQ7Z5R6 666 aaPredicted RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 ECHDC2Q86YB7 292 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 FAM178BQ8IXR5 827 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 CCDC65Q8IXS2 484 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 CNNM3Q8NE01 707 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 TIFAQ96CG3 184 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 ZNF689Q96CS4 500 aaPredicted RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 CCDC34Q96HJ3 373 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 FIZ1Q96SL8 496 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 YME1L1Q96TA2 773 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 MRPL4Q9BYD3 311 aaKnown RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 GOLPH3LQ9H4A5 285 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 RC3H2Q9HBD1 1191 aaKnown RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 PRM3Q9NNZ6 103 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 FAM105AQ9NUU6 356 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 LRFN2Q9ULH4 789 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 PCDHB2Q9Y5E7 798 aa8.81□□□□□ -1
SMAD4-204ENST00000586253 LAMA2P24043 3122 aaKnown RBP8.81□□□□□ -1
SMAD4-204ENST00000586253 PVALEFA0A1B0GWK0 134 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 K7ENM7 598 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 UPP2O95045 317 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ZNF202O95125 648 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 RABGGTBP53611 331 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 GTF2BQ00403 316 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 FAM160A1Q05DH4 1040 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 STRN3Q13033 797 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ALCAMQ13740 583 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 LONRF3Q496Y0 759 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 UBXN11Q5T124 520 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 KANK3Q6NY19 840 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 SLC27A1Q6PCB7 646 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ZPBP2Q6X784 338 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 UNC13DQ70J99 1090 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 TAS1R3Q7RTX0 852 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ZNF720Q7Z2F6 126 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 HAUS6Q7Z4H7 955 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 TMCO2Q7Z6W1 182 aaPredicted RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 MRPL10Q7Z7H8 261 aaKnown RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 CMTR2Q8IYT2 770 aaKnown RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 HACE1Q8IYU2 909 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 FMR1NBQ8N0W7 255 aaPredicted RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 HVCN1Q96D96 273 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 PGBD4Q96DM1 585 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 PAGE5Q96GU1 130 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 CPB2Q96IY4 423 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ADPGKQ9BRR6 497 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 ZHX3Q9H4I2 956 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 PDZD7Q9H5P4 517 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 UBN1Q9NPG3 1134 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 PANK4Q9NVE7 773 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 NXF1Q9UBU9 619 aaKnown RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 SERTAD1Q9UHV2 236 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 TBX20Q9UMR3 447 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 TNFSF13BQ9Y275 285 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 YBX2Q9Y2T7 364 aaKnown RBP8.8□□□□□ -1
SMAD4-204ENST00000586253 ZMYM2Q9UBW7 1377 aa8.8□□□□□ -1
SMAD4-204ENST00000586253 SZT2Q5T011 3432 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 FNDC1Q4ZHG4 1894 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 RBAK-RBAKDNI3L0D1 243 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 CAPN5O15484 640 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 B4GALT5O43286 388 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 TOM1L1O75674 476 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 AP1G2O75843 785 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 PIGRP01833 764 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 EDN1P05305 212 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 CA3P07451 260 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 IDEP14735 1019 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 ATF7P17544 494 aaPredicted RBP8.79□□□□□ -1
SMAD4-204ENST00000586253 PROZP22891 400 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 AFMP43652 599 aa8.79□□□□□ -1
SMAD4-204ENST00000586253 UBE2HP62256 183 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms