RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 SLC27A1Q6PCB7 646 aa21.69■■□□□ 1.06
PTBP1-208ENST00000585956 ADSSL1Q8N142 457 aa21.69■■□□□ 1.06
PTBP1-208ENST00000585956 NKD2Q969F2 451 aaPredicted RBP21.69■■□□□ 1.06
PTBP1-208ENST00000585956 NFKBIZQ9BYH8 718 aa21.69■■□□□ 1.06
PTBP1-208ENST00000585956 PARP2Q9UGN5 583 aa21.69■■□□□ 1.06
PTBP1-208ENST00000585956 PCDHA12Q9UN75 941 aa21.69■■□□□ 1.06
PTBP1-208ENST00000585956 MYH15Q9Y2K3 1946 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 LRRN2O75325 713 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 MED24O75448 989 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 DCNP07585 359 aaKnown RBP21.68■■□□□ 1.06
PTBP1-208ENST00000585956 HTR4Q13639 388 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 TFDP1Q14186 410 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 NSUN7Q8NE18 718 aaKnown RBP21.68■■□□□ 1.06
PTBP1-208ENST00000585956 CLSTN3Q9BQT9 956 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 COLEC11Q9BWP8 271 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 PRKD2Q9BZL6 878 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 TRIM6Q9C030 488 aaPredicted RBP21.68■■□□□ 1.06
PTBP1-208ENST00000585956 PDZD7Q9H5P4 517 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 TBC1D17Q9HA65 648 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 POLD4Q9HCU8 107 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 DLGAP2Q9P1A6 1054 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 WNT16Q9UBV4 365 aa21.68■■□□□ 1.06
PTBP1-208ENST00000585956 ANHXE9PGG2 379 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 BAG4O95429 457 aaKnown RBP21.67■■□□□ 1.06
PTBP1-208ENST00000585956 LAMP2P13473 410 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 GLULP15104 373 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 GRIK3Q13003 919 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 USP41Q3LFD5 358 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 CDCA2Q69YH5 1023 aaPredicted RBP21.67■■□□□ 1.06
PTBP1-208ENST00000585956 GTF3C6Q969F1 213 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 NAP1L4Q99733 375 aaKnown RBP21.67■■□□□ 1.06
PTBP1-208ENST00000585956 SNTG2Q9NY99 539 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 FNIP2Q9P278 1114 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 SSX2IPQ9Y2D8 614 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 NUMBLQ9Y6R0 609 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 R4GN57 208 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 CACNA1IQ9P0X4 2223 aa21.67■■□□□ 1.06
PTBP1-208ENST00000585956 CACNA1AO00555 2505 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 LRRIQ4A6NIV6 560 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 NEMFO60524 1076 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 SRFP11831 508 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 XBP1P17861 261 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 HSP90AA2PQ14568 343 aaPredicted RBP21.66■■□□□ 1.06
PTBP1-208ENST00000585956 PCBP1Q15365 356 aaKnown RBP eCLIP21.66■■□□□ 1.062e-8■■□□□ 13.9
PTBP1-208ENST00000585956 SPECC1Q5M775 1068 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 EEF1DP3Q658K8 133 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 POTEHQ6S545 545 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 DIS3L2Q8IYB7 885 aaKnown RBP21.66■■□□□ 1.06
PTBP1-208ENST00000585956 LNX1Q8TBB1 728 aaPredicted RBP21.66■■□□□ 1.06
PTBP1-208ENST00000585956 FGF14Q92915 247 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 RTP3Q9BQQ7 232 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 FOXQ1Q9C009 403 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 FZD8Q9H461 694 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 GPR179Q6PRD1 2367 aa21.66■■□□□ 1.06
PTBP1-208ENST00000585956 TRIP11Q15643 1979 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 ZMYND10O75800 440 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 PARM1Q6UWI2 310 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 CD300LGQ6UXG3 332 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 RSPO2Q6UXX9 243 aaPredicted RBP21.65■■□□□ 1.06
PTBP1-208ENST00000585956 CYP26C1Q6V0L0 522 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 PPP4R3CPQ6ZMV5 832 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 GRASPQ7Z6J2 395 aaPredicted RBP21.65■■□□□ 1.06
PTBP1-208ENST00000585956 CATSPER3Q86XQ3 398 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 NOSTRINQ8IVI9 506 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 STAMQ92783 540 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 KIFC3Q9BVG8 833 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 PLEKHA4Q9H4M7 779 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 PIDD1Q9HB75 910 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 ZDHHC7Q9NXF8 308 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 FBXW11Q9UKB1 542 aa21.65■■□□□ 1.06
PTBP1-208ENST00000585956 OTOGLQ3ZCN5 2332 aa21.64■■□□□ 1.06
PTBP1-208ENST00000585956 STK25O00506 426 aa21.64■■□□□ 1.05
PTBP1-208ENST00000585956 TADA2AO75478 443 aa21.64■■□□□ 1.05
PTBP1-208ENST00000585956 HDAC7Q8WUI4 952 aa21.64■■□□□ 1.05
PTBP1-208ENST00000585956 CCDC113Q9H0I3 377 aa21.64■■□□□ 1.05
PTBP1-208ENST00000585956 FANCMQ8IYD8 2048 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 CCL16O15467 120 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 RECQL4O94761 1208 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 ATP2B1P20020 1258 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 GUCY1B3Q02153 619 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 TUSC3Q13454 348 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 ECM1Q16610 540 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 FAM171A1Q5VUB5 890 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 ITFG1Q8TB96 612 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.63■■□□□ 1.05
PTBP1-208ENST00000585956 HCFC1R1Q9NWW0 138 aa21.63■■□□□ 1.05
PTBP1-208ENST00000585956 SF3B1O75533 1304 aaKnown RBP eCLIP21.62■■□□□ 1.052e-6■■■■■ 45.6
PTBP1-208ENST00000585956 FSHRP23945 695 aa21.62■■□□□ 1.05
PTBP1-208ENST00000585956 GPC5P78333 572 aa21.62■■□□□ 1.05
PTBP1-208ENST00000585956 NCBP1Q09161 790 aaKnown RBP21.62■■□□□ 1.05
PTBP1-208ENST00000585956 CEP57Q86XR8 500 aa21.62■■□□□ 1.05
PTBP1-208ENST00000585956 MAML2Q8IZL2 1156 aaPredicted RBP21.62■■□□□ 1.05
PTBP1-208ENST00000585956 PIK3R5Q8WYR1 880 aa21.62■■□□□ 1.05
PTBP1-208ENST00000585956 ARHGEF3Q9NR81 526 aa21.62■■□□□ 1.05
PTBP1-208ENST00000585956 MTF2Q9Y483 593 aaPredicted RBP21.62■■□□□ 1.05
PTBP1-208ENST00000585956 ZMYM2Q9UBW7 1377 aa21.61■■□□□ 1.05
PTBP1-208ENST00000585956 NRG2O14511 850 aaPredicted RBP21.61■■□□□ 1.05
PTBP1-208ENST00000585956 NR1I2O75469 434 aa21.61■■□□□ 1.05
PTBP1-208ENST00000585956 LIG1P18858 919 aa21.61■■□□□ 1.05
PTBP1-208ENST00000585956 MCM7P33993 719 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms