RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 BICD1Q96G01 975 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 EEF2KMTQ96G04 330 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 DUSP9Q99956 384 aaKnown RBP18.25■□□□□ 0.51
GCDH-203ENST00000585420 TMEM134Q9H6X4 195 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 PRMT7Q9NVM4 692 aaPredicted RBP18.25■□□□□ 0.51
GCDH-203ENST00000585420 MTMR10Q9NXD2 777 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 TRAF3IP3Q9Y228 551 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 XIRP2A4UGR9 3374 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 COL4A6Q14031 1691 aa18.25■□□□□ 0.51
GCDH-203ENST00000585420 TGFB1I1O43294 461 aa18.24■□□□□ 0.51
GCDH-203ENST00000585420 AXLP30530 894 aa18.24■□□□□ 0.51
GCDH-203ENST00000585420 NCBP1Q09161 790 aaKnown RBP18.24■□□□□ 0.51
GCDH-203ENST00000585420 FAM187BQ17R55 369 aa18.24■□□□□ 0.51
GCDH-203ENST00000585420 NOTUMQ6P988 496 aa18.24■□□□□ 0.51
GCDH-203ENST00000585420 PRIMPOLQ96LW4 560 aa18.24■□□□□ 0.51
GCDH-203ENST00000585420 EIF2AQ9BY44 585 aaKnown RBP18.24■□□□□ 0.51
GCDH-203ENST00000585420 SAMSN1Q9NSI8 373 aaKnown RBP18.24■□□□□ 0.51
GCDH-203ENST00000585420 MEIS3P2A8K0S8 358 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 HNRNPDLO14979 420 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 PRKCBP05771 671 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 MRE11P49959 708 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 PLCB2Q00722 1185 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 BTG3Q14201 252 aaPredicted RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 UVSSAQ2YD98 709 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 EDRF1Q3B7T1 1238 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 PAN2Q504Q3 1202 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 FOXR2Q6PJQ5 311 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 GOLGA5Q8TBA6 731 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 KCNN1Q92952 543 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 LPPQ93052 612 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 GUCD1Q96NT3 240 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 SRRTQ9BXP5 876 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 AGPAT3Q9NRZ7 376 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 RNF19AQ9NV58 838 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 MTUS1Q9ULD2 1270 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 PCDHB2Q9Y5E7 798 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 PRUNE2Q8WUY3 3088 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 A0A1B0GUA9 196 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 ACKR2O00590 384 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 CLIC2O15247 247 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 ZNF623O75123 536 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 EOMESO95936 686 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 FKBP3Q00688 224 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 PRPF4BQ13523 1007 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 NOC3LQ8WTT2 800 aaKnown RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 C17orf80Q9BSJ5 609 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 HSD3B7Q9H2F3 369 aa18.23■□□□□ 0.51
GCDH-203ENST00000585420 RNF216Q9NWF9 866 aaPredicted RBP18.23■□□□□ 0.51
GCDH-203ENST00000585420 TRANK1O15050 2925 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 CNTNAP2Q9UHC6 1331 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 REV3LO60673 3130 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 TISP43B9A030 160 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 FGFR1OPO95684 399 aaKnown RBP18.22■□□□□ 0.51
GCDH-203ENST00000585420 NR3C1P04150 777 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 NR2F2P24468 414 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 LIG4P49917 911 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 RAB27AP51159 221 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 CLLU1OSQ5K130 101 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 CREBRFQ8IUR6 639 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 FIBCD1Q8N539 461 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 ARNTL2Q8WYA1 636 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 PRDM12Q9H4Q4 367 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 THAP9Q9H5L6 903 aa18.22■□□□□ 0.51
GCDH-203ENST00000585420 EPOPA6NHQ4 379 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 TBKBP1A7MCY6 615 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 LINC00271P0C7V0 271 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 CDK11BP21127 795 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 RPL13P26373 211 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 ADAM9Q13443 819 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 TMEM132AQ24JP5 1023 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 SMG8Q8ND04 991 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 CCDC51Q96ER9 411 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 TGS1Q96RS0 853 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 CDX2Q99626 313 aaPredicted RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 MRPL4Q9BYD3 311 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 CGNQ9P2M7 1197 aaKnown RBP18.21■□□□□ 0.51
GCDH-203ENST00000585420 HES2Q9Y543 173 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 IPPQ9Y573 584 aa18.21■□□□□ 0.51
GCDH-203ENST00000585420 RFXAPO00287 272 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 CETN3O15182 167 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 SKIP12755 728 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 ATP1A3P13637 1013 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 ZNF18P17022 549 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 ERVK-21P61565 698 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 SNRPFP62306 86 aaKnown RBP18.2■□□□□ 0.5
GCDH-203ENST00000585420 CDKAL1Q5VV42 579 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 ARMCX5Q6P1M9 558 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 SLC27A1Q6PCB7 646 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 AGMOQ6ZNB7 445 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 LRRC55Q6ZSA7 311 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 CMTR2Q8IYT2 770 aaKnown RBP18.2■□□□□ 0.5
GCDH-203ENST00000585420 HELQQ8TDG4 1101 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 CASD1Q96PB1 797 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 TARS2Q9BW92 718 aaKnown RBP18.2■□□□□ 0.5
GCDH-203ENST00000585420 RNF39Q9H2S5 420 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 PDZD7Q9H5P4 517 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 MAGEC2Q9UBF1 373 aaPredicted RBP18.2■□□□□ 0.5
GCDH-203ENST00000585420 HCSTQ9UBK5 93 aa18.2■□□□□ 0.5
GCDH-203ENST00000585420 MRPL42Q9Y6G3 142 aaKnown RBP18.2■□□□□ 0.5
GCDH-203ENST00000585420 ANKRD63C9JTQ0 380 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms