RNA–Protein interactions for RNA: ENST00000584991.5

CDK5RAP3-236, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,862 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-236ENST00000584991 EXOC8Q8IYI6 725 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 LRRC71Q8N4P6 559 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 ZBTB10Q96DT7 871 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 ACCSQ96QU6 501 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 LRRC1Q9BTT6 524 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SAGE1Q9NXZ1 904 aa16.22■□□□□ 0.19
CDK5RAP3-236ENST00000584991 ADGRA3Q8IWK6 1321 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 DENND3A2RUS2 1198 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SHOX2O60902 331 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 RPL13P26373 211 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 CPT1AP50416 773 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 MKRN4PQ13434 485 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 SH3GL2Q99962 352 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 LSM14BQ9BX40 385 aaKnown RBP16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 TMEM206Q9H813 350 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 DAAM1Q9Y4D1 1078 aa16.21■□□□□ 0.19
CDK5RAP3-236ENST00000584991 GTPBP10A4D1E9 387 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GAS2O43903 313 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ADCY3O60266 1144 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 DUSP11O75319 330 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NR3C1P04150 777 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GGCXP38435 758 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 BRDTQ58F21 947 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MEI1Q5TIA1 1274 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 IER5Q5VY09 327 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 C8orf74Q6P047 294 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NFRKBQ6P4R8 1299 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HS2ST1Q7LGA3 356 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 FMNL3Q8IVF7 1028 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 C1orf131Q8NDD1 294 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 FAM76AQ8TAV0 307 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RAET1EQ8TD07 263 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TCP11Q8WWU5 503 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PRPF31Q8WWY3 499 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 JPH2Q9BR39 696 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GANQ9H2C0 597 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TBX20Q9UMR3 447 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 LRRIQ4A6NIV6 560 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 AGPSO00116 658 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SLC16A3O15427 465 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SEPT4O43236 478 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 C22orf31O95567 290 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GNRH1P01148 92 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MYL3P08590 195 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PRKAR2AP13861 404 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PRKCIP41743 596 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NAMPTP43490 491 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KLHL30Q0D2K2 578 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KCNH2Q12809 1159 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PPP2R5AQ15172 486 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ASIC2Q16515 512 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 FSCN1Q16658 493 aaKnown RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 EFCAB12Q6NXP0 572 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 METTL13Q8N6R0 699 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KAT2BQ92831 832 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ARHGAP28Q9P2N2 729 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 ARMCX3Q9UH62 379 aaPredicted RBP16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KCNG1Q9UIX4 513 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 INTUQ9ULD6 942 aa16.2■□□□□ 0.18
CDK5RAP3-236ENST00000584991 COL1A2P08123 1366 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GFPT2O94808 682 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 C6orf222P0C671 652 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KLRC1P26715 233 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CCND3P30281 292 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CAPSQ13938 189 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NFIL3Q16649 462 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 KIAA0753Q2KHM9 967 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MREGQ8N565 214 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 DEPTORQ8TB45 409 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HVCN1Q96D96 273 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NLRC4Q9NPP4 1024 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GDF3Q9NR23 364 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 AGPAT3Q9NRZ7 376 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SUCLA2Q9P2R7 463 aaPredicted RBP16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 DMGDHQ9UI17 866 aaKnown RBP16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 SALL4Q9UJQ4 1053 aa16.19■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 TISP43B9A030 160 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PHACTR2O75167 634 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 F2P00734 622 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 AFPP02771 609 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MYBL2P10244 700 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CLCN3P51790 818 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 NAP1L1P55209 391 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GRIK4Q16099 956 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 MAP4K3Q8IVH8 894 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PPP1R13LQ8WUF5 828 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PSPC1Q8WXF1 523 aaKnown RBP16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 PBKQ96KB5 322 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 FAM107BQ9H098 131 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 EXOC7Q9UPT5 735 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 CENPFP49454 3210 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GOLGA6CA6NDK9 693 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 H0YCG3 227 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 HMGCRP04035 888 aa16.18■□□□□ 0.18
CDK5RAP3-236ENST00000584991 GOLGA6DP0CG33 693 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms