RNA–Protein interactions for RNA: ENST00000584582.5

TOP3A-217, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 3,661 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-217ENST00000584582 MMS22LQ6ZRQ5 1243 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 NOP9Q86U38 636 aaKnown RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 RHOT2Q8IXI1 618 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 CLEC4DQ8WXI8 215 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 MPHOSPH6Q99547 160 aaKnown RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 FMNL3Q8IVF7 1028 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 TIAM2Q8IVF5 1701 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 MYH1P12882 1939 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 POC1B-GALNT4F8VUJ3 575 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 NFKBIEO00221 500 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 RRM1P23921 792 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 CLCN3P51790 818 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 RWDD2BP57060 319 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 FSTL1Q12841 308 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 LRRC14Q15048 493 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 ZNF568Q3ZCX4 644 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 XKR3Q5GH77 459 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 RUFY4Q6ZNE9 571 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 B4GALNT4Q76KP1 1039 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 SEMA4DQ92854 862 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 COPS5Q92905 334 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 CYFIP2Q96F07 1278 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 CLMNQ96JQ2 1002 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 MKNK1Q9BUB5 465 aa12.1□□□□□ -0.47
TOP3A-217ENST00000584582 TRIM6Q9C030 488 aaPredicted RBP12.1□□□□□ -0.47
TOP3A-217ENST00000584582 ZNF862O60290 1169 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 TCF7P36402 384 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 FKBP1AP62942 108 aaKnown RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 DPP9Q86TI2 863 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 HOOK3Q86VS8 718 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 ARFGAP2Q8N6H7 521 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 RNF169Q8NCN4 708 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 MDM1Q8TC05 714 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 CNTNAP1P78357 1384 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 F5H423 210 aaPredicted RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 MAP3K6O95382 1288 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 CYP11B1P15538 503 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 FECHP22830 423 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 PTGER2P43116 358 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 NOVP48745 357 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 CABS1Q96KC9 395 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 CALN1Q9BXU9 219 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 VPS37BQ9H9H4 285 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 TXNP10599 105 aaKnown RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 MAPK6Q16659 721 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 SMTNL2Q2TAL5 461 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 WDR72Q3MJ13 1102 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 APOBEC3FQ8IUX4 373 aaKnown RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 PARD3BQ8TEW8 1205 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 PRPF31Q8WWY3 499 aaKnown RBP12.09□□□□□ -0.47
TOP3A-217ENST00000584582 NLRP7Q8WX94 980 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 ZNF536O15090 1300 aa12.09□□□□□ -0.47
TOP3A-217ENST00000584582 TLR3O15455 904 aaKnown RBP12.08□□□□□ -0.48
TOP3A-217ENST00000584582 GRAP2O75791 330 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 ECEL1O95672 775 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 GAS8O95995 478 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 TMEM253P0C7T8 217 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 ZBTB41Q5SVQ8 909 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 TREML2Q5T2D2 321 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 CYP4A22Q5TCH4 519 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 BSPRYQ5W0U4 402 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 PRUNE1Q86TP1 453 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 VSIG10LQ86VR7 867 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 FBXO25Q8TCJ0 367 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 GGT7Q9UJ14 662 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 RTN2O75298 545 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 SYF2O95926 243 aaKnown RBP12.08□□□□□ -0.48
TOP3A-217ENST00000584582 ALCAMQ13740 583 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 WHAMMQ8TF30 809 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 PSPC1Q8WXF1 523 aaKnown RBP12.08□□□□□ -0.48
TOP3A-217ENST00000584582 ALG3Q92685 438 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 MTMR12Q9C0I1 747 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 RASSF4Q9H2L5 321 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 PCNTO95613 3336 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 IRF6O14896 467 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 PJA2O43164 708 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 TNNC2P02585 160 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 KRT1P04264 644 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 FLT3P36888 993 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 NCOA4Q13772 614 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 DNAJC24Q6P3W2 148 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 EPM2AIP1Q7L775 607 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-217ENST00000584582 NT5DC3Q86UY8 548 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 C4orf19Q8IY42 314 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 TTC16Q8NEE8 873 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 GDAP1Q8TB36 358 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.08□□□□□ -0.48
TOP3A-217ENST00000584582 GMLQ99445 158 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 UBIAD1Q9Y5Z9 338 aa12.08□□□□□ -0.48
TOP3A-217ENST00000584582 CCDC188H7C350 402 aa12.07□□□□□ -0.48
TOP3A-217ENST00000584582 MYO1CO00159 1063 aa12.07□□□□□ -0.48
TOP3A-217ENST00000584582 KRT10P13645 584 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms