RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 CCDC195A0A1B0GUA6 201 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 PI15O43692 258 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 DGAT1O75907 488 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 AXLP30530 894 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 DSG1Q02413 1049 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 RESTQ13127 1097 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 TDGQ13569 410 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 RILPL1Q5EBL4 403 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 FAM173BQ6P4H8 233 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 SIX5Q8N196 739 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 CMASQ8NFW8 434 aaPredicted RBP17.32■□□□□ 0.36
SKA2-209ENST00000583976 CXCL16Q9H2A7 254 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 RXFP1Q9HBX9 757 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 UBN1Q9NPG3 1134 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 STK39Q9UEW8 545 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 PCDHA12Q9UN75 941 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 USP20Q9Y2K6 914 aa17.32■□□□□ 0.36
SKA2-209ENST00000583976 VWA8A3KMH1 1905 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 PRR23AA6NEV1 266 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 LRRIQ4A6NIV6 560 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 EDN1P05305 212 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 GBP2P32456 591 aaPredicted RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 PKP1Q13835 747 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 POTEGQ6S5H5 508 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 GET4Q7L5D6 327 aaPredicted RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 BRAPQ7Z569 592 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 PALB2Q86YC2 1186 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 BSNDQ8WZ55 320 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 SMG7Q92540 1137 aaKnown RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 MTMR9Q96QG7 549 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 WDR6Q9NNW5 1121 aaKnown RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 ANKEF1Q9NU02 776 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 GIT1Q9Y2X7 761 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 DOCK6Q96HP0 2047 aa17.31■□□□□ 0.36
SKA2-209ENST00000583976 MTCL1Q9Y4B5 1905 aaKnown RBP17.31■□□□□ 0.36
SKA2-209ENST00000583976 CASTOR2A6NHX0 329 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 TGM5O43548 720 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 MED24O75448 989 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 CFHP08603 1231 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 GRIK3Q13003 919 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 PCBP1Q15365 356 aaKnown RBP eCLIP17.3■□□□□ 0.361e-6■■■■□ 22.1
SKA2-209ENST00000583976 RTP2Q5QGT7 225 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 SLC27A1Q6PCB7 646 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 PRSS55Q6UWB4 352 aaPredicted RBP17.3■□□□□ 0.36
SKA2-209ENST00000583976 FRMD5Q7Z6J6 570 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 RIN2Q8WYP3 895 aaPredicted RBP17.3■□□□□ 0.36
SKA2-209ENST00000583976 NFKBIZQ9BYH8 718 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 CHST7Q9NS84 486 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 FBXL21Q9UKT6 434 aa17.3■□□□□ 0.36
SKA2-209ENST00000583976 PROB1E7EW31 1015 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 KIF4AO95239 1232 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 SPATA31C1P0DKV0 1188 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 AOC1P19801 751 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 NBL1P41271 181 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 CLCN5P51795 746 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 NUBP1P53384 320 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 PTGDRQ13258 359 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 CDCA2Q69YH5 1023 aaPredicted RBP17.29■□□□□ 0.36
SKA2-209ENST00000583976 HACE1Q8IYU2 909 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 KIFC3Q9BVG8 833 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 PDZD7Q9H5P4 517 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.29■□□□□ 0.36
SKA2-209ENST00000583976 ADAM28Q9UKQ2 775 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 RIF1Q5UIP0 2472 aaKnown RBP17.29■□□□□ 0.36
SKA2-209ENST00000583976 FAM186AA6NE01 2351 aa17.29■□□□□ 0.36
SKA2-209ENST00000583976 GVINP1Q7Z2Y8 2422 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 SPTBN4Q9H254 2564 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 MYH15Q9Y2K3 1946 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 KRBA1A5PL33 1030 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 PTGESO14684 152 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 OR52Z1P0C646 297 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 POU5F1BQ06416 359 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 ORC2Q13416 577 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 FOXD4L6Q3SYB3 417 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 FOXD4L3Q6VB84 417 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 PPP4R3CPQ6ZMV5 832 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 CCDC105Q8IYK2 499 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 C4orf32Q8N8J7 132 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 COLEC11Q9BWP8 271 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 IRF2BPLQ9H1B7 796 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 DAXXQ9UER7 740 aaPredicted RBP17.28■□□□□ 0.36
SKA2-209ENST00000583976 CA14Q9ULX7 337 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 SSX2IPQ9Y2D8 614 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 ZMYM2Q9UBW7 1377 aa17.28■□□□□ 0.36
SKA2-209ENST00000583976 A0A1B0GUA9 196 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 RECQL4O94761 1208 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 PDIA4P13667 645 aaKnown RBP17.27■□□□□ 0.36
SKA2-209ENST00000583976 LIG1P18858 919 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 CEBPZQ03701 1054 aaKnown RBP17.27■□□□□ 0.36
SKA2-209ENST00000583976 NCBP1Q09161 790 aaKnown RBP17.27■□□□□ 0.36
SKA2-209ENST00000583976 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.36
SKA2-209ENST00000583976 EEF1DP3Q658K8 133 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 CATSPER3Q86XQ3 398 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 IGSF9Q9P2J2 1179 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 EPS15L1Q9UBC2 864 aa17.27■□□□□ 0.36
SKA2-209ENST00000583976 SF3B1O75533 1304 aaKnown RBP eCLIP17.26■□□□□ 0.357e-6■■■■■ 33.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms