RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 CLCN4P51793 760 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 NPEPPSP55786 919 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 AGMOQ6ZNB7 445 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 CCDC149Q6ZUS6 474 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 ANO5Q75V66 913 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 GPR149Q86SP6 731 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 FLCNQ8NFG4 579 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 ETNPPLQ8TBG4 499 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 FAM200AQ8TCP9 573 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 RSPH1Q8WYR4 309 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 AIFM3Q96NN9 605 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 KLHL5Q96PQ7 755 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 INO80BQ9C086 356 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 RSAD1Q9HA92 442 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 IFT122Q9HBG6 1241 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 SH3GLB2Q9NR46 395 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 AGPAT5Q9NUQ2 364 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 PCDHA4Q9UN74 947 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 PCDHB2Q9Y5E7 798 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 CYP3A7-CYP3A51PA0A087WV96 503 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 M0R2N6 131 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 C2CD2LO14523 706 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 PI15O43692 258 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 ZNF623O75123 536 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 POMCP01189 267 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 CNPP09543 421 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 FBXO45P0C2W1 286 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MYBP10242 640 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 NPR3P17342 541 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 CYP3A7P24462 503 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 KLRC2P26717 231 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 PSMC5P62195 406 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 CDC42EP1Q00587 391 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 TOB2Q14106 344 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 NPY5RQ15761 445 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 INF2Q27J81 1249 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 UBXN11Q5T124 520 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 FRMD5Q7Z6J6 570 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 PPFIBP1Q86W92 1011 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 TRIM22Q8IYM9 498 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 BLIDQ8IZY5 108 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 FBXL16Q8N461 479 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 URGCPQ8TCY9 931 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 TMEM143Q96AN5 459 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 ACSF2Q96CM8 615 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 PGBD4Q96DM1 585 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MBOAT7Q96N66 472 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 FAM193BQ96PV7 902 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 EMILIN2Q9BXX0 1053 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 C22orf23Q9BZE7 217 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MINDY3Q9H8M7 445 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MARCH5Q9NX47 278 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 WRAP73Q9P2S5 460 aaPredicted RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 DDX25Q9UHL0 483 aaKnown RBP8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 DUSP12Q9UNI6 340 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 COL4A3BPQ9Y5P4 624 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MYH15Q9Y2K3 1946 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 FANCMQ8IYD8 2048 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 VPS13AQ96RL7 3174 aa8.71□□□□□ -1.02
SMCHD1-210ENST00000583800 MIA3Q5JRA6 1907 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 NRP1O14786 923 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 NARSO43776 548 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 N4BP1O75113 896 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 DEXIO95424 95 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 SRGAP2CP0DJJ0 459 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 AOC1P19801 751 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 CLCN5P51795 746 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 EVCP57679 992 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 SSRP1Q08945 709 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 TDGQ13569 410 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 NONOQ15233 471 aaKnown RBP eCLIP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 LETM2Q2VYF4 491 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 MOXD1Q6UVY6 613 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 OTOP3Q7RTS5 596 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 MRPL10Q7Z7H8 261 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 ZSCAN1Q8NBB4 408 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 DAGLBQ8NCG7 672 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 FAM174AQ8TBP5 190 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 SLC7A3Q8WY07 619 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 CEP170P1Q96L14 293 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 JPH2Q9BR39 696 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 TMEM175Q9BSA9 504 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 HERC2P3Q9BVR0 1158 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 KCNK12Q9HB15 430 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 MAN1C1Q9NR34 630 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 FBXL21Q9UKT6 434 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 VAV3Q9UKW4 847 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 FAN1Q9Y2M0 1017 aa8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 PRG3Q9Y2Y8 225 aaPredicted RBP8.7□□□□□ -1.02
SMCHD1-210ENST00000583800 GVINP1Q7Z2Y8 2422 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 F8W810 466 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 CPLX1O14810 134 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 INPPL1O15357 1258 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 SOD2P04179 222 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 URODP06132 367 aa8.69□□□□□ -1.02
SMCHD1-210ENST00000583800 NCLP19338 710 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms