RNA–Protein interactions for RNA: ENST00000583753.5

RNF43-207, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-207ENST00000583753 SNF8Q96H20 258 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ACCSQ96QU6 501 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 TTC1Q99614 292 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 TRABDQ9H4I3 376 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ZWILCHQ9H900 591 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ATP6V0A4Q9HBG4 840 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.61e-8■□□□□ 9.5
RNF43-207ENST00000583753 MARCOQ9UEW3 520 aaPredicted RBP11.28□□□□□ -0.6
RNF43-207ENST00000583753 POLLQ9UGP5 575 aa11.28□□□□□ -0.6
RNF43-207ENST00000583753 ASTN1O14525 1302 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 RARGP13631 454 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 PPP4CP60510 307 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 PDIA2Q13087 525 aaKnown RBP11.27□□□□□ -0.6
RNF43-207ENST00000583753 SPARCL1Q14515 664 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 RASA3Q14644 834 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 DUPD1Q68J44 220 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 TTC27Q6P3X3 843 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 CBWD2Q8IUF1 395 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 GBP7Q8N8V2 638 aaPredicted RBP11.27□□□□□ -0.6
RNF43-207ENST00000583753 TBC1D16Q8TBP0 767 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 HES6Q96HZ4 224 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 GBP5Q96PP8 586 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 DLGAP2Q9P1A6 1054 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 SUGT1Q9Y2Z0 365 aa11.27□□□□□ -0.6
RNF43-207ENST00000583753 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 RTN2O75298 545 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PPFIA2O75334 1257 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PPATQ06203 517 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 CFAP157Q5JU67 520 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 ISLR2Q6UXK2 745 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 SCARA5Q6ZMJ2 495 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 COL23A1Q86Y22 540 aaPredicted RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 JDP2Q8WYK2 163 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 FAM20AQ96MK3 541 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 IMPG2Q9BZV3 1241 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 WNT8AQ9H1J5 351 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 ADAM22Q9P0K1 906 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 NAALADL1Q9UQQ1 740 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PFASO15067 1338 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 H0YGN5 161 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 IPO5O00410 1097 aaKnown RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 GYG2O15488 501 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 OPHN1O60890 802 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 ZSCAN5DPP0CG00 497 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PIK3CAP42336 1068 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PRELPP51888 382 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 ORC2Q13416 577 aaPredicted RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 CLUL1Q15846 466 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 TMEM270Q6UE05 265 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 HAUS6Q7Z4H7 955 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 USP37Q86T82 979 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 CCHCR1Q8TD31 782 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 RSAD2Q8WXG1 361 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 HSPBP1Q9NZL4 362 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 CCPG1Q9ULG6 757 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 G3BP2Q9UN86 482 aaKnown RBP11.27□□□□□ -0.61
RNF43-207ENST00000583753 NFS1Q9Y697 457 aa11.27□□□□□ -0.61
RNF43-207ENST00000583753 PITPNM2Q9BZ72 1349 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 KRT19P08727 400 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 CCND1P24385 295 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 EPHB2P29323 1055 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 STAT2P52630 851 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 NCALDP61601 193 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 DCAF12L1Q5VU92 463 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 TMEM154Q6P9G4 183 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 CYFIP1Q7L576 1253 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 SPDYE1Q8NFV5 336 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 CCDC17Q96LX7 622 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 RMDN2Q96LZ7 410 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 C12orf65Q9H3J6 166 aaKnown RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 DNAJC18Q9H819 358 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 FBXO28Q9NVF7 368 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ARP10275 920 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ESRRAP11474 423 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 ECHS1P30084 290 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 HSPA1LP34931 641 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 CRKP46108 304 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ARSEP51690 589 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 PPP2R5DQ14738 602 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ANKRD20A2Q5SQ80 823 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ANKRD20A1Q5TYW2 823 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ZNF572Q7Z3I7 529 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 CDCA7Q9BWT1 371 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 TRIM4Q9C037 500 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 VCXQ9H320 206 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 TRAF3IP3Q9Y228 551 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 DIS3Q9Y2L1 958 aaKnown RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 TGFB1I1O43294 461 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 RRM1P23921 792 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 ECE1P42892 770 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 CTCFP49711 727 aaPredicted RBP11.26□□□□□ -0.61
RNF43-207ENST00000583753 OSTNP61366 133 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 PPP3CAQ08209 521 aa11.26□□□□□ -0.61
RNF43-207ENST00000583753 AP3B2Q13367 1082 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms