RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 PYCARDQ9ULZ3 195 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 MICAL3Q7RTP6 2002 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 COL1A2P08123 1366 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 IGKV6-21A0A0C4DH24 114 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 EPOPA6NHQ4 379 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 TISP43B9A030 160 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 SKILP12757 684 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 INSRRP14616 1297 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 CASP14P31944 242 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 CCZ1BP86790 482 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 CCZ1P86791 482 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 PPFIA1Q13136 1202 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 CAPSQ13938 189 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 DCAF17Q5H9S7 520 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 TCERG1LQ5VWI1 586 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 EFCAB12Q6NXP0 572 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 C12orf56Q8IXR9 622 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 CCDC112Q8NEF3 446 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 PRPF31Q8WWY3 499 aaKnown RBP13.7□□□□□ -0.22
SRSF1-204ENST00000581979 SEPT8Q92599 483 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 ZBED2Q9BTP6 218 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 NUP58Q9BVL2 599 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 OSBPL7Q9BZF2 842 aa13.7□□□□□ -0.22
SRSF1-204ENST00000581979 REV3LO60673 3130 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 LCHNA4D1U4 455 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 K7ERI5 159 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 MAGEB2O15479 319 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 C22orf31O95567 290 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 GYPCP04921 128 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 CTSHP09668 335 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 KCNH2Q12809 1159 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 MXD4Q14582 209 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-204ENST00000581979 GRIK4Q16099 956 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 MARCH8Q5T0T0 291 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.69□□□□□ -0.224e-10■■■■■ 56.8
SRSF1-204ENST00000581979 CNGA4Q8IV77 575 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 METTL13Q8N6R0 699 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 TC2NQ8N9U0 490 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 PPM1EQ8WY54 764 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 CBWD1Q9BRT8 395 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 CERS4Q9HA82 394 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 PRDM6Q9NQX0 595 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 HSPBP1Q9NZL4 362 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 SUCLA2Q9P2R7 463 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-204ENST00000581979 MTCH2Q9Y6C9 303 aa13.69□□□□□ -0.22
SRSF1-204ENST00000581979 PRRC2BQ5JSZ5 2229 aaKnown RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 PHLPP2Q6ZVD8 1323 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 ANKRD63C9JTQ0 380 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RBAK-RBAKDNI3L0D1 243 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RFXAPO00287 272 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 HNRNPDLO14979 420 aaKnown RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 MFAP3LO75121 409 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 CHRNA1P02708 482 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 AFPP02771 609 aaKnown RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 AMHP03971 560 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 TRIM21P19474 475 aaKnown RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 KLRC1P26715 233 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 KLK7P49862 253 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 LIG4P49917 911 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 CLCN3P51790 818 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 LAMTOR4Q0VGL1 99 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 TFDP1Q14186 410 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 CCDC85BQ15834 202 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RHPN2Q8IUC4 686 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 ZBTB8OSQ8IWT0 167 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 XXYLT1Q8NBI6 393 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RDH13Q8NBN7 331 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 TMEM174Q8WUU8 243 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
SRSF1-204ENST00000581979 ARNTL2Q8WYA1 636 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 TMEM134Q9H6X4 195 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 MMRN2Q9H8L6 949 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 TTC28Q96AY4 2481 aa13.68□□□□□ -0.22
SRSF1-204ENST00000581979 RRN3P2A6NIE6 340 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 ASAP2O43150 1006 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 SRGAP2CP0DJJ0 459 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 KRT13P13646 458 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 HTRA4P83105 476 aaPredicted RBP13.67□□□□□ -0.22
SRSF1-204ENST00000581979 MGAT3Q09327 533 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 TJAP1Q5JTD0 557 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 TAS1R3Q7RTX0 852 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 SPRED2Q7Z698 418 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 POMGNT1Q8WZA1 660 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 APBB2Q92870 758 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 KCNN1Q92952 543 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 ZBTB10Q96DT7 871 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 IQCDQ96DY2 449 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 CCDC51Q96ER9 411 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 PANX2Q96RD6 677 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 INSL6Q9Y581 213 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 SPTBN5Q9NRC6 3674 aaKnown RBP13.67□□□□□ -0.22
SRSF1-204ENST00000581979 EVPLQ92817 2033 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 LINC01553A4QN01 128 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 LPXNO60711 386 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 RPLP2P05387 115 aaKnown RBP13.67□□□□□ -0.22
SRSF1-204ENST00000581979 TMOD1P28289 359 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 ERVK-21P61565 698 aa13.67□□□□□ -0.22
SRSF1-204ENST00000581979 MTHFD1LQ6UB35 978 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms