RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 NELL2Q99435 816 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 TTPALQ9BTX7 342 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 DDX23Q9BUQ8 820 aaKnown RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 OSBPL6Q9BZF3 934 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 NXF3Q9H4D5 531 aaKnown RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 RGL1Q9NZL6 768 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 KLK14Q9P0G3 267 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 POLIQ9UNA4 740 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 MTF2Q9Y483 593 aaPredicted RBP11.04□□□□□ -0.64
RFFL-208ENST00000581039 PCDHGA2Q9Y5H1 932 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 DNAH14Q0VDD8 3507 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 DMXL1Q9Y485 3027 aa11.04□□□□□ -0.64
RFFL-208ENST00000581039 SF3B1O75533 1304 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFFL-208ENST00000581039 GPR179Q6PRD1 2367 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 ZBTB39O15060 712 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 TBX3O15119 743 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 NCAM2O15394 837 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CCL16O15467 120 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CCNT1O60563 726 aaKnown RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 XYLBO75191 536 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 BAG4O95429 457 aaKnown RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 NPTXRO95502 500 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 C8AP07357 584 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 GCFC2P16383 781 aaKnown RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 ARF4P18085 180 aaPredicted RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 MAGEA9P43362 315 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 NTHL1P78549 312 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CYP4A11Q02928 519 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 MBTD1Q05BQ5 628 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 HSP90AA2PQ14568 343 aaPredicted RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 RTP2Q5QGT7 225 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 ZBTB41Q5SVQ8 909 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 FAM171A1Q5VUB5 890 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 NCAPH2Q6IBW4 605 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 SLC27A1Q6PCB7 646 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 RSPO2Q6UXX9 243 aaPredicted RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 NEK8Q86SG6 692 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 IFNLR1Q8IU57 520 aaPredicted RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 DYDC2Q96IM9 177 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CNTNAP3BQ96NU0 1288 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 NAP1L4Q99733 375 aaKnown RBP11.03□□□□□ -0.64
RFFL-208ENST00000581039 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 PHF20Q9BVI0 1012 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 CNTNAP3Q9BZ76 1288 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 FBXW11Q9UKB1 542 aa11.03□□□□□ -0.64
RFFL-208ENST00000581039 DOCK8Q8NF50 2099 aa11.02□□□□□ -0.64
RFFL-208ENST00000581039 CACNA1BQ00975 2339 aa11.02□□□□□ -0.64
RFFL-208ENST00000581039 A0A1B0GUA9 196 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 PRR5-ARHGAP8B1AHC4 643 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 SLITRK3O94933 977 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 CD72P21854 359 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 ATXN1P54253 815 aaKnown RBP11.02□□□□□ -0.65
RFFL-208ENST00000581039 ARHGAP8P85298 464 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 TUSC3Q13454 348 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 NPY5RQ15761 445 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 PSMD5Q16401 504 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 AMHR2Q16671 573 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 PDXDC1Q6P996 788 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 SKAP1Q86WV1 359 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 CDR2LQ86X02 465 aaPredicted RBP11.02□□□□□ -0.65
RFFL-208ENST00000581039 ITFG1Q8TB96 612 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.65
RFFL-208ENST00000581039 ASAP3Q8TDY4 903 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 HASPINQ8TF76 798 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 HAS1Q92839 578 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 AIFM3Q96NN9 605 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 NFKBIZQ9BYH8 718 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 LTB4R2Q9NPC1 389 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 XPNPEP1Q9NQW7 623 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 ZSCAN32Q9NX65 697 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 KCNJ14Q9UNX9 436 aa11.02□□□□□ -0.65
RFFL-208ENST00000581039 TPRP12270 2363 aaKnown RBP11.02□□□□□ -0.65
RFFL-208ENST00000581039 EPG5Q9HCE0 2579 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 CASTOR2A6NHX0 329 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 B4GALT5O43286 388 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 DGAT1O75907 488 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 GLRA2P23416 452 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 HOXA9P31269 272 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 ARL2P36404 184 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 LMNB2Q03252 620 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 ELAVL2Q12926 359 aaKnown RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 CAPSQ13938 189 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 UVSSAQ2YD98 709 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 AXDND1Q5T1B0 1012 aaPredicted RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 ZNF852Q6ZMS4 543 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 PIK3AP1Q6ZUJ8 805 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 RUFY3Q7L099 469 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 SLFN12Q8IYM2 578 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 ZBTB44Q8NCP5 570 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 SLC7A14Q8TBB6 771 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 PIK3R5Q8WYR1 880 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 ZNF274Q96GC6 653 aaPredicted RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 CCDC43Q96MW1 224 aaKnown RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 KXD1Q9BQD3 176 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 PAAF1Q9BRP4 392 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 CACNG4Q9UBN1 327 aa11.01□□□□□ -0.65
RFFL-208ENST00000581039 CDV3Q9UKY7 258 aaKnown RBP11.01□□□□□ -0.65
RFFL-208ENST00000581039 KCNH3Q9ULD8 1083 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms