RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 POMCP01189 267 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 MLH1P40692 756 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 DHX8Q14562 1220 aaKnown RBP27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 TPRNQ4KMQ1 711 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 SPECC1Q5M775 1068 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 SPIRE2Q8WWL2 714 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 LARP4BQ92615 738 aaKnown RBP27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 CLIC6Q96NY7 704 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 GAD1Q99259 594 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 BLOC1S4Q9NUP1 217 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 LARSQ9P2J5 1176 aaKnown RBP27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 ARHGAP28Q9P2N2 729 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 PARP2Q9UGN5 583 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 ODF2LQ9ULJ1 636 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 USP34Q70CQ2 3546 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 TTLL13PA6NNM8 815 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 NT5C1B-RDH14C9J2C7 533 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 KRT18P05783 430 aaKnown RBP27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 VCPP55072 806 aaKnown RBP27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 DCAF4L1Q3SXM0 396 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 ATF7IP2Q5U623 682 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 ZNF280BQ86YH2 543 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 TMEM175Q9BSA9 504 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 NTPCRQ9BSD7 190 aaKnown RBP27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 ADAM7Q9H2U9 754 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 TSHZ2Q9NRE2 1034 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 NR2E1Q9Y466 385 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 ZMYM2Q9UBW7 1377 aa27.31■■□□□ 1.96
CDC42EP4-205ENST00000580315 SLC16A4O15374 487 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 CLASP2O75122 1294 aaKnown RBP27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 F13A1P00488 732 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 GALTP07902 379 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 AKAP5P24588 427 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 DDIT3P35638 169 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 ITIH3Q06033 890 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 MCM6Q14566 821 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 BMS1Q14692 1282 aaKnown RBP27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 ARSHQ5FYA8 562 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 CES5AQ6NT32 575 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 ZBTB33Q86T24 672 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 LINC00301Q8NCQ3 95 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 MRPL4Q9BYD3 311 aaKnown RBP27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 DNAJB4Q9UDY4 337 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 STK17AQ9UEE5 414 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 USP20Q9Y2K6 914 aa27.3■■□□□ 1.96
CDC42EP4-205ENST00000580315 NPHP3-ACAD11A0A0J9YXS1 232 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 H0YCG3 227 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 SPTLC2O15270 562 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 ALDH2P05091 517 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 AVPR2P30518 371 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 SLC11A1P49279 550 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 SCNN1GP51170 649 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 AFF1P51825 1210 aaKnown RBP27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 STRN3Q13033 797 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 NT5DC1Q5TFE4 455 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 RRAGBQ5VZM2 374 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 USP49Q70CQ1 688 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 IGSF21Q96ID5 467 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 ZFP42Q96MM3 310 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 NECTIN4Q96NY8 510 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 RPS6KC1Q96S38 1066 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 REEP2Q9BRK0 252 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 POMKQ9H5K3 350 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 TFIP11Q9UBB9 837 aaKnown RBP27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 TNFSF13BQ9Y275 285 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 CACNA1HO95180 2353 aa27.29■■□□□ 1.96
CDC42EP4-205ENST00000580315 NR1I2O75469 434 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 DDHD2O94830 711 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 FAM13AO94988 1023 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 CXCL14O95715 111 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 EDN1P05305 212 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 CACNB1Q02641 598 aaPredicted RBP27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 EEF1DP3Q658K8 133 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 KREMEN2Q8NCW0 462 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 LRRC15Q8TF66 581 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 STK39Q9UEW8 545 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 FAN1Q9Y2M0 1017 aa27.28■■□□□ 1.96
CDC42EP4-205ENST00000580315 PPP6R2O75170 966 aa27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 YEATS4O95619 227 aa27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 CA8P35219 290 aa27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 TMEM173Q86WV6 379 aaPredicted RBP27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 VPS52Q8N1B4 723 aa27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 KMT2EQ8IZD2 1858 aa27.27■■□□□ 1.96
CDC42EP4-205ENST00000580315 C2CD4DB7Z1M9 353 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 TBCAO75347 108 aaKnown RBP27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 PDGFBP01127 241 aaPredicted RBP27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 SCP2P22307 547 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 GRIK3Q13003 919 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 ATL3Q6DD88 541 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 CCDC73Q6ZRK6 1079 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 DDX53Q86TM3 631 aaKnown RBP27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 TMEM161BQ8NDZ6 487 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 RIPOR3Q96MK2 946 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 ACO2Q99798 780 aaKnown RBP27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 ZBP1Q9H171 429 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 PARVGQ9HBI0 331 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 SNTG2Q9NY99 539 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 KLK14Q9P0G3 267 aa27.26■■□□□ 1.95
CDC42EP4-205ENST00000580315 B4GALT3O60512 393 aa27.25■■□□□ 1.95
CDC42EP4-205ENST00000580315 MAPTP10636 758 aaKnown RBP27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms