RNA–Protein interactions for RNA: ENST00000579743.2

GGA3-208, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-208ENST00000579743 RHOBTB2Q9BYZ6 727 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 BHMT2Q9H2M3 363 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 CHST7Q9NS84 486 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 IGSF9Q9P2J2 1179 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 CDH22Q9UJ99 828 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 KIAA1024Q9UPX6 916 aa15.12■□□□□ 0.01
GGA3-208ENST00000579743 U2AF2P26368 475 aaKnown RBP eCLIP15.11■□□□□ 0.01
GGA3-208ENST00000579743 GBP2P32456 591 aaPredicted RBP15.11■□□□□ 0.01
GGA3-208ENST00000579743 YARSP54577 528 aaKnown RBP15.11■□□□□ 0.01
GGA3-208ENST00000579743 PTGDRQ13258 359 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 RABEP1Q15276 862 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 KANK3Q6NY19 840 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 DTHD1Q6ZMT9 781 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 TAS1R1Q7RTX1 841 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 PALB2Q86YC2 1186 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 SMG7Q92540 1137 aaKnown RBP15.11■□□□□ 0.01
GGA3-208ENST00000579743 PDZD7Q9H5P4 517 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 ZDHHC7Q9NXF8 308 aa15.11■□□□□ 0.01
GGA3-208ENST00000579743 CCDC169A6NNP5 214 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 TRAPPC3O43617 180 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 BRD1O95696 1058 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 ASGR2P07307 311 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 PRPHP41219 470 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 DMP1Q13316 513 aaPredicted RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 TDGQ13569 410 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 RILPL1Q5EBL4 403 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 MCTP1Q6DN14 999 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 CEP57Q86XR8 500 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 RNF168Q8IYW5 571 aaPredicted RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 KCTD17Q8N5Z5 321 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 GSTCDQ8NEC7 633 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 NXPE3Q969Y0 559 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 DRC1Q96MC2 740 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 TTPALQ9BTX7 342 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 CCDC94Q9BW85 323 aaPredicted RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 WDR6Q9NNW5 1121 aaKnown RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 TOPORSQ9NS56 1045 aaPredicted RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 DDX19AQ9NUU7 478 aaKnown RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 SNTG2Q9NY99 539 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 FBXL21Q9UKT6 434 aa15.1■□□□□ 0.01
GGA3-208ENST00000579743 RBM19Q9Y4C8 960 aaKnown RBP15.1■□□□□ 0.01
GGA3-208ENST00000579743 CASTOR2A6NHX0 329 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 H3BQV1 296 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 RECQL4O94761 1208 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 RFX1P22670 979 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 LIN9Q5TKA1 542 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 IGSF22Q8N9C0 903 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 CDK5RAP3Q96JB5 506 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 UROC1Q96N76 676 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 TIPINQ9BVW5 301 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 GPR62Q9BZJ7 368 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 C17orf75Q9HAS0 396 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.09■□□□□ 0.01
GGA3-208ENST00000579743 GDAQ9Y2T3 454 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 CLUHO75153 1309 aa15.09■□□□□ 0.01
GGA3-208ENST00000579743 ZNF318Q5VUA4 2279 aa15.08■□□□□ 0
GGA3-208ENST00000579743 TGM5O43548 720 aa15.08■□□□□ 0
GGA3-208ENST00000579743 EFEMP2O95967 443 aa15.08■□□□□ 0
GGA3-208ENST00000579743 MCM2P49736 904 aa15.08■□□□□ 0
GGA3-208ENST00000579743 SMTNP53814 917 aa15.08■□□□□ 0
GGA3-208ENST00000579743 IER5LQ5T953 404 aa15.08■□□□□ 0
GGA3-208ENST00000579743 FAM171A1Q5VUB5 890 aa15.08■□□□□ 0
GGA3-208ENST00000579743 GLYCTKQ8IVS8 523 aa15.08■□□□□ 0
GGA3-208ENST00000579743 PRSS33Q8NF86 280 aa15.08■□□□□ 0
GGA3-208ENST00000579743 BSNDQ8WZ55 320 aa15.08■□□□□ 0
GGA3-208ENST00000579743 TCHPQ9BT92 498 aa15.08■□□□□ 0
GGA3-208ENST00000579743 MRPL4Q9BYD3 311 aaKnown RBP15.08■□□□□ 0
GGA3-208ENST00000579743 CCDC113Q9H0I3 377 aa15.08■□□□□ 0
GGA3-208ENST00000579743 NT5C3AQ9H0P0 336 aa15.08■□□□□ 0
GGA3-208ENST00000579743 KCNK12Q9HB15 430 aa15.08■□□□□ 0
GGA3-208ENST00000579743 KMT5AQ9NQR1 393 aa15.08■□□□□ 0
GGA3-208ENST00000579743 XYLBO75191 536 aa15.07■□□□□ 0
GGA3-208ENST00000579743 SPATA31D3P0C874 917 aa15.07■□□□□ 0
GGA3-208ENST00000579743 CLCN5P51795 746 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PEX3P56589 373 aa15.07■□□□□ 0
GGA3-208ENST00000579743 STRN3Q13033 797 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PSMD5Q16401 504 aa15.07■□□□□ 0
GGA3-208ENST00000579743 ASTLQ6HA08 431 aaPredicted RBP15.07■□□□□ 0
GGA3-208ENST00000579743 DCLRE1AQ6PJP8 1040 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.07■□□□□ 0
GGA3-208ENST00000579743 SPATA31D4Q6ZUB0 917 aa15.07■□□□□ 0
GGA3-208ENST00000579743 C4orf32Q8N8J7 132 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PIK3R5Q8WYR1 880 aa15.07■□□□□ 0
GGA3-208ENST00000579743 RABGGTAQ92696 567 aa15.07■□□□□ 0
GGA3-208ENST00000579743 ATOH1Q92858 354 aaPredicted RBP15.07■□□□□ 0
GGA3-208ENST00000579743 DDX27Q96GQ7 796 aaKnown RBP15.07■□□□□ 0
GGA3-208ENST00000579743 B3GALT6Q96L58 329 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PRKD2Q9BZL6 878 aa15.07■□□□□ 0
GGA3-208ENST00000579743 TMEM134Q9H6X4 195 aa15.07■□□□□ 0
GGA3-208ENST00000579743 SLC38A7Q9NVC3 462 aa15.07■□□□□ 0
GGA3-208ENST00000579743 TNFSF13BQ9Y275 285 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PCDHB6Q9Y5E3 794 aa15.07■□□□□ 0
GGA3-208ENST00000579743 ZFP37Q9Y6Q3 630 aaPredicted RBP15.07■□□□□ 0
GGA3-208ENST00000579743 MYO10Q9HD67 2058 aa15.07■□□□□ 0
GGA3-208ENST00000579743 PIEZO1Q92508 2521 aa15.06■□□□□ 0
GGA3-208ENST00000579743 F8W810 466 aa15.06■□□□□ 0
GGA3-208ENST00000579743 STK25O00506 426 aa15.06■□□□□ 0
GGA3-208ENST00000579743 RFPL2O75678 378 aa15.06■□□□□ 0
GGA3-208ENST00000579743 ZMYND10O75800 440 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms