RNA–Protein interactions for RNA: ENST00000579605.5

CDK5RAP3-213, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 560 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-213ENST00000579605 MAMSTRQ6ZN01 415 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LONP2Q86WA8 852 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CNNM3Q8NE01 707 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 DNASE1L2Q92874 299 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CEP89Q96ST8 783 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SMOC1Q9H4F8 434 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 COL4A3BPQ9Y5P4 624 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SPEGQ15772 3267 aa14.75□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MSH4O15457 936 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 STBD1O95210 358 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZIC2O95409 532 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GSPT1P15170 499 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CNR2P34972 360 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LIFRP42702 1097 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 JAK3P52333 1124 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PSMD5Q16401 504 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FAM171A1Q5VUB5 890 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PLA2G4FQ68DD2 849 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MIER3Q7Z3K6 550 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TEX2Q8IWB9 1127 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PRPF31Q8WWY3 499 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CPB2Q96IY4 423 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MTA3Q9BTC8 594 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 IER2Q9BTL4 223 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LSM14BQ9BX40 385 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TEKT3Q9BXF9 490 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 BMP2KQ9NSY1 1161 aaPredicted RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RBM12Q9NTZ6 932 aaKnown RBP14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 KCNH3Q9ULD8 1083 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PIAS3Q9Y6X2 628 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZFYVE26Q68DK2 2539 aa14.74□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GIPC1O14908 333 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TOP3BO95985 862 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZNF806P0C7X5 589 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CHRNB1P11230 501 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CEBPBP17676 345 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 AKAP5P24588 427 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CCNE1P24864 410 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GDI1P31150 447 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SFNP31947 248 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SLC5A9Q2M3M2 681 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LRCH2Q5VUJ6 765 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SRGAP1Q7Z6B7 1085 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GPR65Q8IYL9 337 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LNX1Q8TBB1 728 aaPredicted RBP14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TMEM143Q96AN5 459 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LENG9Q96B70 501 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ELSPBP1Q96BH3 223 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PAAF1Q9BRP4 392 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TTPALQ9BTX7 342 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TRMT61BQ9BVS5 477 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GDE1Q9NZC3 331 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 KLK14Q9P0G3 267 aa14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RBM8AQ9Y5S9 174 aaKnown RBP14.73□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CEP295Q9C0D2 2601 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZZEF1O43149 2961 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 DOCK6Q96HP0 2047 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CNOT1A5YKK6 2376 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 K7ESF4 209 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ERLIN2O94905 339 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RHOP08100 348 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 HOXA9P31269 272 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 NOVA1P51513 510 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 NPEPPSP55786 919 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SPEM1Q8N4L4 309 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CCDC136Q96JN2 1154 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 JPH2Q9BR39 696 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZFP14Q9HCL3 533 aa14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZNF334Q9HCZ1 680 aaPredicted RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RBM28Q9NW13 759 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 MYH9P35579 1960 aaKnown RBP14.72□□□□□ -0.05
CDK5RAP3-213ENST00000579605 SF3B1O75533 1304 aaKnown RBP eCLIP14.71□□□□□ -0.051e-11■■■■■ 43.1
CDK5RAP3-213ENST00000579605 hCG_1984214I3L0E3 225 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 NRG2O14511 850 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CHMLP26374 656 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 OR1D2P34982 312 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 LAMTOR4Q0VGL1 99 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FUT2Q10981 343 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RTN1Q16799 776 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 FAM78AQ5JUQ0 283 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RNF43Q68DV7 783 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ANO5Q75V66 913 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 REXO1Q8N1G1 1221 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZNF713Q8N859 430 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ZNF579Q8NAF0 562 aaKnown RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PIK3R5Q8WYR1 880 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 IRF7Q92985 503 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 RIT2Q99578 217 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 ADAM33Q9BZ11 813 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 TRIM6Q9C030 488 aaPredicted RBP14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 C6orf50Q9HD87 102 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 C2orf42Q9NWW7 574 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 PARP2Q9UGN5 583 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 GIT1Q9Y2X7 761 aa14.71□□□□□ -0.05
CDK5RAP3-213ENST00000579605 CASTOR2A6NHX0 329 aa14.7□□□□□ -0.06
CDK5RAP3-213ENST00000579605 FCARP24071 287 aa14.7□□□□□ -0.06
CDK5RAP3-213ENST00000579605 CIITAP33076 1130 aa14.7□□□□□ -0.06
CDK5RAP3-213ENST00000579605 PXNP49023 591 aaPredicted RBP14.7□□□□□ -0.06
CDK5RAP3-213ENST00000579605 NCBP1Q09161 790 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms