RNA–Protein interactions for RNA: ENST00000578987.1

NUP85-209, Transcript of nucleoporin 85, humanhuman

TSL 3

Gene NUP85, Length 388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-209ENST00000578987 NT5C3AQ9H0P0 336 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 CSRNP2Q9H175 543 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 POLR3FQ9H1D9 316 aaPredicted RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 TMEM60Q9H2L4 133 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 NXF3Q9H4D5 531 aaKnown RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 ZSWIM4Q9H7M6 989 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 TTC12Q9H892 705 aaPredicted RBP4.27□□□□□ -1.73
NUP85-209ENST00000578987 SNTG2Q9NY99 539 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 KANSL3Q9P2N6 904 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 USTQ9Y2C2 406 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 DENND4CQ5VZ89 1909 aa4.27□□□□□ -1.73
NUP85-209ENST00000578987 CNTNAP2Q9UHC6 1331 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 PRR23AA6NEV1 266 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CASTOR2A6NHX0 329 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 POTEMA6NI47 508 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 LRRIQ4A6NIV6 560 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 PROB1E7EW31 1015 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 I3L4J1 428 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 TBX3O15119 743 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CCL16O15467 120 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 ADAM12O43184 909 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 JAK2O60674 1132 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 USO1O60763 962 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 MED24O75448 989 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 SEC24BO95487 1268 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 EFEMP2O95967 443 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GLUD1P00367 558 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 EDN1P05305 212 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 SPATA31C1P0DKV0 1188 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GCFC2P16383 781 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 XBP1P17861 261 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 AOC1P19801 751 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CD72P21854 359 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 MCM7P33993 719 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 ARL2P36404 184 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 NBL1P41271 181 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GLUD2P49448 558 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 RARRES1P49788 294 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GPC5P78333 572 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 DSG1Q02413 1049 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 DSC1Q08554 894 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 NCBP1Q09161 790 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 PDAP1Q13442 181 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 SNW1Q13573 536 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 TFDP1Q14186 410 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 MXD4Q14582 209 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 ANGPT1Q15389 498 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 ZNF174Q15697 407 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CALCRLQ16602 461 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 ECM1Q16610 540 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 USP41Q3LFD5 358 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 RTP2Q5QGT7 225 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 FAM171A1Q5VUB5 890 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 EEF1DP3Q658K8 133 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 FUT10Q6P4F1 479 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 NOTUMQ6P988 496 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 LILRA6Q6PI73 481 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 C15orf39Q6ZRI6 1047 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GET4Q7L5D6 327 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 OTOP3Q7RTS5 596 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GRASPQ7Z6J2 395 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 CATSPER3Q86XQ3 398 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 SLFN12Q8IYM2 578 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 RNF168Q8IYW5 571 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 ADSSL1Q8N142 457 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 TMEM130Q8N3G9 435 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CNNM3Q8NE01 707 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 ITFG1Q8TB96 612 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 KCNG4Q8TDN1 519 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GPR152Q8TDT2 470 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 BSNDQ8WZ55 320 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 TNFRSF25Q93038 417 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 NKD2Q969F2 451 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 ZNF707Q96C28 371 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 SNX27Q96L92 541 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 HSD17B14Q9BPX1 270 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 IRF2BPLQ9H1B7 796 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 RXFP1Q9HBX9 757 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 WDR6Q9NNW5 1121 aaKnown RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 UBN1Q9NPG3 1134 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 CHST7Q9NS84 486 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 HCFC1R1Q9NWW0 138 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 POLIQ9UNA4 740 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 DUSP12Q9UNI6 340 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 SSX2IPQ9Y2D8 614 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GDAQ9Y2T3 454 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 GIT1Q9Y2X7 761 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 MTF2Q9Y483 593 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 R4GN57 208 aa4.26□□□□□ -1.73
NUP85-209ENST00000578987 PTPRZ1P23471 2315 aaPredicted RBP4.26□□□□□ -1.73
NUP85-209ENST00000578987 MYO15AQ9UKN7 3530 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 CLUHO75153 1309 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 A0A1B0GUA9 196 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 NRG2O14511 850 aaPredicted RBP4.25□□□□□ -1.73
NUP85-209ENST00000578987 PTGESO14684 152 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 NEMFO60524 1076 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 NR1I2O75469 434 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 DGAT1O75907 488 aa4.25□□□□□ -1.73
NUP85-209ENST00000578987 CDKL5O76039 1030 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms