RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 IMPACTQ9P2X3 320 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 AGO2Q9UKV8 859 aaKnown RBP15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 ST3GAL5Q9UNP4 418 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 TNFSF13BQ9Y275 285 aa15.16■□□□□ 0.02
CSNK1D-209ENST00000578904 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.16■□□□□ 0.026e-7■■□□□ 12.4
CSNK1D-209ENST00000578904 H0YGN5 161 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 EXTL3O43909 919 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 N4BP1O75113 896 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 AKAP3O75969 853 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 TRIM14Q14142 442 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 SURF1Q15526 300 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 TCERG1LQ5VWI1 586 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 PSRC1Q6PGN9 363 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 MPZL3Q6UWV2 235 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 FAM43BQ6ZT52 329 aaPredicted RBP15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 TRIM59Q8IWR1 403 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 DBF4BQ8NFT6 615 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 EEF2KMTQ96G04 330 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 PDLIM2Q96JY6 352 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 CBWD1Q9BRT8 395 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 NDST4Q9H3R1 872 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 ANKFY1Q9P2R3 1169 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 PIN4Q9Y237 131 aaKnown RBP15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 CITO14578 2027 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 CNTNAP2Q9UHC6 1331 aa15.15■□□□□ 0.02
CSNK1D-209ENST00000578904 A0A0B4J269 797 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 A0A1W2PQC6 194 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 ANKRD63C9JTQ0 380 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 DLL1O00548 723 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 B4GALT5O43286 388 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 NRDCO43847 1150 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 TSPAN1O60635 241 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 ACTN1P12814 892 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 GSDMDP57764 484 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 POU5F1Q01860 360 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 BFSP1Q12934 665 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 NOLC1Q14978 699 aaKnown RBP eCLIP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 SNRNP35Q16560 246 aaKnown RBP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 AMHR2Q16671 573 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 ZNF568Q3ZCX4 644 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 DCAF17Q5H9S7 520 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 SPECC1LQ69YQ0 1117 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 TRIM44Q96DX7 344 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 FBXL18Q96ME1 805 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 NAP1L5Q96NT1 182 aaPredicted RBP15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 NUP58Q9BVL2 599 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 AGPAT5Q9NUQ2 364 aa15.14■□□□□ 0.01
CSNK1D-209ENST00000578904 OGTO15294 1046 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 AP5Z1O43299 807 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 AFPP02771 609 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 MCF2P10911 925 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 ZSCAN20P17040 1043 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 ADSSP30520 456 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 CASP4P49662 377 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 VAMP7P51809 220 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 EPHB4P54760 987 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 MCL1Q07820 350 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 TCTN1Q2MV58 587 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 DCAF4L1Q3SXM0 396 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 NOTUMQ6P988 496 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 APTXQ7Z2E3 356 aaKnown RBP15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 PPFIBP1Q86W92 1011 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 RDH13Q8NBN7 331 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 TMC2Q8TDI7 906 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 VWCEQ96DN2 955 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 CCDC51Q96ER9 411 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 CPB2Q96IY4 423 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 PCMTD1Q96MG8 357 aaPredicted RBP15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 FNBP1Q96RU3 617 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 FTHL17Q9BXU8 183 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 TMX1Q9H3N1 280 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 ITIH6Q6UXX5 1313 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 TET1Q8NFU7 2136 aa15.13■□□□□ 0.01
CSNK1D-209ENST00000578904 FGBP02675 491 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 EDN1P05305 212 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 ARF4P18085 180 aaPredicted RBP15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 GTF2H1P32780 548 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 KCNH2Q12809 1159 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 IKBKEQ14164 716 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 TWF2Q6IBS0 349 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 SLC39A4Q6P5W5 647 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 ZNF365Q70YC5 407 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 OTOP2Q7RTS6 562 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 TMC6Q7Z403 805 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 VSTM4Q8IW00 320 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.12■□□□□ 0.011e-8■■□□□ 13.5
CSNK1D-209ENST00000578904 FAM213AQ9BRX8 229 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 UBE2OQ9C0C9 1292 aaKnown RBP15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 CHST12Q9NRB3 414 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 USP20Q9Y2K6 914 aa15.12■□□□□ 0.01
CSNK1D-209ENST00000578904 A0A1B0GUA9 196 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 ABHD14A-ACY1A0A1B0GW23 586 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 TTLL13PA6NNM8 815 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 ZBBXA8MT70 800 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 P4HA2O15460 535 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 MGEA5O60502 916 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 EFCAB14O75071 495 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 BAIAP3O94812 1187 aa15.11■□□□□ 0.01
CSNK1D-209ENST00000578904 IBSPP21815 317 aaPredicted RBP15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms