RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 GCOM2Q9BZD3 368 aaPredicted RBP12.48□□□□□ -0.41
GGA3-206ENST00000578773 VPS45Q9NRW7 570 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 MRPS23Q9Y3D9 190 aaKnown RBP12.48□□□□□ -0.41
GGA3-206ENST00000578773 HES2Q9Y543 173 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 CEP192Q8TEP8 1941 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 NUP210Q8TEM1 1887 aaPredicted RBP12.47□□□□□ -0.41
GGA3-206ENST00000578773 SLC38A8A6NNN8 435 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 ARNTLO00327 626 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 IFIT3O14879 490 aaKnown RBP12.47□□□□□ -0.41
GGA3-206ENST00000578773 DCLK1O15075 740 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 SEC24BO95487 1268 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 RHOP08100 348 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 CEACAM1P13688 526 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 RXRAP19793 462 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 TMOD1P28289 359 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 VIPR2P41587 438 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 CCR2P41597 374 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 RAB27AP51159 221 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 PRKCEQ02156 737 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 LIN9Q5TKA1 542 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 CATSPER4Q7RTX7 472 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 PGBD4Q96DM1 585 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 RSPRY1Q96DX4 576 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 ZSWIM3Q96MP5 696 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 CEP89Q96ST8 783 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 EIF2AQ9BY44 585 aaKnown RBP12.47□□□□□ -0.41
GGA3-206ENST00000578773 ANO3Q9BYT9 981 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 DUSP15Q9H1R2 295 aaPredicted RBP12.47□□□□□ -0.41
GGA3-206ENST00000578773 MINDY3Q9H8M7 445 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 AGPAT5Q9NUQ2 364 aa12.47□□□□□ -0.41
GGA3-206ENST00000578773 IGLV3-22A0A075B6J6 115 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 ARL5CA6NH57 179 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 OATP04181 439 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 CCDC192P0DO97 292 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 SKIP12755 728 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 CSRP1P21291 193 aaKnown RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 SFPQP23246 707 aaKnown RBP eCLIP12.46□□□□□ -0.41
GGA3-206ENST00000578773 IGFBP6P24592 240 aaPredicted RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 PDE1AP54750 535 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 ANTXR2P58335 489 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 FAM193AP78312 1265 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 FGD1P98174 961 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 SCAPQ12770 1279 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 IMMTQ16891 758 aaKnown RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 UAP1L1Q3KQV9 507 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 USP41Q3LFD5 358 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 PLK5Q496M5 336 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 AXDND1Q5T1B0 1012 aaPredicted RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 PLA2G4DQ86XP0 818 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 CHCHD4Q8N4Q1 142 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 RSPH1Q8WYR4 309 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 TRMT61BQ9BVS5 477 aaKnown RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 CNNM2Q9H8M5 875 aa12.46□□□□□ -0.41
GGA3-206ENST00000578773 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.46□□□□□ -0.41
GGA3-206ENST00000578773 SEC63Q9UGP8 760 aaKnown RBP12.46□□□□□ -0.41
GGA3-206ENST00000578773 CNTNAP2Q9UHC6 1331 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 EIF4E1BA6NMX2 242 aaKnown RBP12.45□□□□□ -0.42
GGA3-206ENST00000578773 XYLBO75191 536 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 C1RP00736 705 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 MS4A1P11836 297 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 PLA2G2AP14555 144 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 SDSP20132 328 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 HOXA9P31269 272 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 HOXA11P31270 313 aaPredicted RBP12.45□□□□□ -0.42
GGA3-206ENST00000578773 CREB5Q02930 508 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 TARBP2Q15633 366 aaKnown RBP12.45□□□□□ -0.42
GGA3-206ENST00000578773 PRSS36Q5K4E3 855 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
GGA3-206ENST00000578773 RHPN2Q8IUC4 686 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 GPIHBP1Q8IV16 184 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 CCDC82Q8N4S0 544 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 GLIS3Q8NEA6 775 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 LNX1Q8TBB1 728 aaPredicted RBP12.45□□□□□ -0.42
GGA3-206ENST00000578773 RILPL2Q969X0 211 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 NLRP4Q96MN2 994 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 APOL6Q9BWW8 343 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 ADAM28Q9UKQ2 775 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 KCNH3Q9ULD8 1083 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 CEP131Q9UPN4 1083 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 PCDHGA5Q9Y5G8 931 aa12.45□□□□□ -0.42
GGA3-206ENST00000578773 URB1O60287 2271 aaKnown RBP12.44□□□□□ -0.42
GGA3-206ENST00000578773 GON4LQ3T8J9 2241 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 IPO5O00410 1097 aaKnown RBP12.44□□□□□ -0.42
GGA3-206ENST00000578773 GJA1P17302 382 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 NT5C2P49902 561 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 PSMD5Q16401 504 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 MTERF2Q49AM1 385 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 DAB2IPQ5VWQ8 1189 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 HEATR3Q7Z4Q2 680 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 GSTCDQ8NEC7 633 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 ZC3H10Q96K80 434 aaKnown RBP12.44□□□□□ -0.42
GGA3-206ENST00000578773 ASB16Q96NS5 453 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 MKNK1Q9BUB5 465 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 IFT122Q9HBG6 1241 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 GDE1Q9NZC3 331 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 KANSL3Q9P2N6 904 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 RAXQ9Y2V3 346 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 IPPQ9Y573 584 aa12.44□□□□□ -0.42
GGA3-206ENST00000578773 HELZP42694 1942 aaKnown RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms