RNA–Protein interactions for RNA: ENST00000578664.1

GAPLINC-201, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3

Gene GAPLINC, Length 440 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-201ENST00000578664 SCG2P13521 617 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 PLS3P13797 630 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ELNP15502 786 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 AMY2BP19961 511 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 FGFR2P21802 821 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 CTSSP25774 331 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ABCD1P33897 745 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 HK3P52790 923 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 JAM2P57087 298 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 RNASE9P60153 205 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 UBE3AQ05086 875 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ZNF362Q5T0B9 420 aaPredicted RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 KLHDC7AQ5VTJ3 777 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 LRCH2Q5VUJ6 765 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ISM2Q6H9L7 571 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ACAD10Q6JQN1 1059 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 TIGD7Q6NT04 549 aaPredicted RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ESRP1Q6NXG1 681 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 MFSD6Q6ZSS7 791 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ESPNLQ6ZVH7 1005 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ZNF765Q7L2R6 523 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 RASGRP2Q7LDG7 609 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 TTC7BQ86TV6 843 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ALYREFQ86V81 257 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 SESTD1Q86VW0 696 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 NGEFQ8N5V2 710 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 KLHL23Q8NBE8 558 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 CEP70Q8NHQ1 597 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 CREB3L4Q8TEY5 395 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 RSAD2Q8WXG1 361 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 HDAC10Q969S8 669 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 SDCCAG3Q96C92 435 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 MTFMTQ96DP5 389 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 FAM167AQ96KS9 214 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 KCNC2Q96PR1 638 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ANO3Q9BYT9 981 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 CDIP1Q9H305 208 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 RC3H2Q9HBD1 1191 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 CYP4F11Q9HBI6 524 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 KCND1Q9NSA2 647 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 SRP68Q9UHB9 627 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 HERC5Q9UII4 1024 aaKnown RBP4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 EDARQ9UNE0 448 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 ATP23Q9Y6H3 246 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 SYNJ2O15056 1496 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 GRIN2BQ13224 1484 aa4.8□□□□□ -1.64
GAPLINC-201ENST00000578664 RUSC2Q8N2Y8 1516 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 A0A0B4J269 797 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 A0A1W2PPL8 197 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 FAM229AH3BQW9 127 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 TRIM38O00635 465 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 PTP4A3O75365 173 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 FTLP02792 175 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ITGA5P08648 1049 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 SPATA31C1P0DKV0 1188 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ZSCAN22P10073 491 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 NR2F1P10589 423 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RARBP10826 455 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CST5P28325 142 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ACTN2P35609 894 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 TNNT3P45378 269 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 FNTBP49356 437 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 SEPHS1P49903 392 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RAC1P63000 192 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 NKX6-1P78426 367 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 HTRA4P83105 476 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CHRNDQ07001 517 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 KCNMA1Q12791 1236 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 TRIM28Q13263 835 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 LSAMPQ13449 338 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 TRIM29Q14134 588 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 SUZ12Q15022 739 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 DLGAP5Q15398 846 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CCDC157Q569K6 752 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 EEF1DP3Q658K8 133 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CWF19L1Q69YN2 538 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RCSD1Q6JBY9 416 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 GPAT2Q6NUI2 795 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 BORAQ6PGQ7 559 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 KLHDC10Q6PID8 442 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CATSPERGQ6ZRH7 1159 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ARHGAP36Q6ZRI8 547 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 TMC6Q7Z403 805 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 PRPF39Q86UA1 669 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RTN4RL1Q86UN2 441 aaPredicted RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 C2CD5Q86YS7 1000 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RIOX2Q8IUF8 465 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CREG2Q8IUH2 290 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 NOSTRINQ8IVI9 506 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 FANCBQ8NB91 859 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 ST8SIA4Q92187 359 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RUBCNQ92622 972 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 FATE1Q969F0 183 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 RGMAQ96B86 450 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 KLHDC7BQ96G42 594 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 CNDP2Q96KP4 475 aaKnown RBP4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 EYA3Q99504 573 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 GDF15Q99988 308 aa4.79□□□□□ -1.64
GAPLINC-201ENST00000578664 DESI2Q9BSY9 194 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms