RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 FAM189A1O60320 539 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 EFCAB14O75071 495 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 UPP2O95045 317 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 AMHP03971 560 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 CXCL8P10145 99 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 SKIP12755 728 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 ITGA4P13612 1032 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 ATF7P17544 494 aaPredicted RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 GRM5P41594 1212 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 KCNJ6P48051 423 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 CASP4P49662 377 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 FAM189BP81408 668 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 DEFB103AP81534 67 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 FKBP3Q00688 224 aaKnown RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 MYL5Q02045 173 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 ADAM9Q13443 819 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 NFIL3Q16649 462 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 HSP90AA4PQ58FG1 418 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 CT47A1Q5JQC4 288 aaPredicted RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 LRRC55Q6ZSA7 311 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 FAM43BQ6ZT52 329 aaPredicted RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 CBWD2Q8IUF1 395 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 FAM212AQ96EL1 285 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 SRRTQ9BXP5 876 aaKnown RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 RNF39Q9H2S5 420 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 PRO3102Q9H379 93 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 RBAKQ9NYW8 714 aaPredicted RBP13.22□□□□□ -0.29
IFT20-207ENST00000578547 LRFN2Q9ULH4 789 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 FRMD4BQ9Y2L6 1034 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 NFE2L3Q9Y4A8 694 aa13.22□□□□□ -0.29
IFT20-207ENST00000578547 MEIS3P2A8K0S8 358 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 KIAA0391O15091 583 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 AKAP3O75969 853 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 RECQL4O94761 1208 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 LDHAP00338 332 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 ADRB2P07550 413 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 CLTAP09496 248 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 FGFR1P11362 822 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 YARSP54577 528 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 SNRNP35Q16560 246 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 KYAT1Q16773 422 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 SPATA1Q5VX52 437 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 FAM117BQ6P1L5 589 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 TMCO2Q7Z6W1 182 aaPredicted RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 CREBRFQ8IUR6 639 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 SLC9A9Q8IVB4 645 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 FAM186BQ8IYM0 893 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 CRIPAKQ8N1N5 446 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 ENOX1Q8TC92 643 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 PGBD4Q96DM1 585 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 RNPC3Q96LT9 517 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 ACAP3Q96P50 834 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 ANP32EQ9BTT0 268 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 TRAIPQ9BWF2 469 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 RPF1Q9H9Y2 349 aaKnown RBP13.21□□□□□ -0.29
IFT20-207ENST00000578547 CBX8Q9HC52 389 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 KIAA1586Q9HCI6 787 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 DMAC2Q9NW81 257 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 KLK14Q9P0G3 267 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 INPP5FQ9Y2H2 1132 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 PCDHB7Q9Y5E2 793 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 SLC4A7Q9Y6M7 1214 aa13.21□□□□□ -0.29
IFT20-207ENST00000578547 ZNF233A6NK53 670 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 BECN2A8MW95 431 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 FGFR1OPO95684 399 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 EPB41P11171 864 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 MLH1P40692 756 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 MYBPC2Q14324 1141 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 ENOX2Q16206 610 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 CCDC40Q4G0X9 1142 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 FOXR2Q6PJQ5 311 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 CRELD2Q6UXH1 353 aaPredicted RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 MRPL10Q7Z7H8 261 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 ZNF598Q86UK7 904 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 LUZP1Q86V48 1076 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 NPAS4Q8IUM7 802 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 DHX40Q8IX18 779 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 ZC3H3Q8IXZ2 948 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 RNF214Q8ND24 703 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 ZFP42Q96MM3 310 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 CEP63Q96MT8 703 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 BPIFA3Q9BQP9 254 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 RNF19AQ9NV58 838 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 TMEM161AQ9NX61 479 aa13.2□□□□□ -0.3
IFT20-207ENST00000578547 CPSF3Q9UKF6 684 aaKnown RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 COLQQ9Y215 455 aaPredicted RBP13.2□□□□□ -0.3
IFT20-207ENST00000578547 SLC16A3O15427 465 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 ZNF623O75123 536 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 CAVIN2O95810 425 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 PSMC2P35998 433 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 GATMP50440 423 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 PPP2R3AQ06190 1150 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 SPAG1Q07617 926 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 CYP24A1Q07973 514 aa13.19□□□□□ -0.3
IFT20-207ENST00000578547 HSP90AA2PQ14568 343 aaPredicted RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 PRPF38BQ5VTL8 546 aaKnown RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 FAM109BQ6ICB4 259 aaPredicted RBP13.19□□□□□ -0.3
IFT20-207ENST00000578547 AGMOQ6ZNB7 445 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms