RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 MSTO1Q9BUK6 570 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 SENP6Q9GZR1 1112 aaPredicted RBP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 ARHGAP20Q9P2F6 1191 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 DDX20Q9UHI6 824 aaKnown RBP18.37■□□□□ 0.53
SREBF1-218ENST00000578469 FHOD1Q9Y613 1164 aa18.37■□□□□ 0.53
SREBF1-218ENST00000578469 TULP1O00294 542 aaPredicted RBP18.36■□□□□ 0.53
SREBF1-218ENST00000578469 KIF5CO60282 957 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 FERP16591 822 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 STAT1P42224 750 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 PHKA2P46019 1235 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 GCLMP48507 274 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 CPT1AP50416 773 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 CLCN3P51790 818 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 APBA1Q02410 837 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 PPP3CAQ08209 521 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 ZNF697Q5TEC3 545 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 SYT10Q6XYQ8 523 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 ZSWIM2Q8NEG5 633 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 NLRP4Q96MN2 994 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 MAP7D2Q96T17 732 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 CCDC113Q9H0I3 377 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 TMEM8AQ9HCN3 771 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 LUC7LQ9NQ29 371 aaKnown RBP18.36■□□□□ 0.53
SREBF1-218ENST00000578469 LZTFL1Q9NQ48 299 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 APEX2Q9UBZ4 518 aa18.36■□□□□ 0.53
SREBF1-218ENST00000578469 SIP14410 1827 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 A0A0B4J269 797 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 DNM1LO00429 736 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 CLDN3O15551 220 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 TOM1L1O75674 476 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 CCDC172P0C7W6 258 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 KIF11P52732 1056 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 PTENP60484 403 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 GNG11P61952 73 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 KLHL30Q0D2K2 578 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 PSMD6Q15008 389 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 GRIK4Q16099 956 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 TMEM132AQ24JP5 1023 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 EPC2Q52LR7 807 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 C1orf220Q5T0J3 134 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 KRT39Q6A163 491 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 IQCEQ6IPM2 695 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 MTHFD1LQ6UB35 978 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 ZNF662Q6ZS27 426 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 PLEKHO2Q8TD55 490 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 FNBP1Q96RU3 617 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 TCHPQ9BT92 498 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 NFKBIZQ9BYH8 718 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 STK33Q9BYT3 514 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 TMEM117Q9H0C3 514 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 HAUS4Q9H6D7 363 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 ANKFY1Q9P2R3 1169 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 DNAJC12Q9UKB3 198 aa18.35■□□□□ 0.53
SREBF1-218ENST00000578469 LRRIQ3A6PVS8 624 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 INO80B-WBP1J3KQ70 363 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 ACKR2O00590 384 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 ADCY6O43306 1168 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 LCA5LO95447 670 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 ANXA13P27216 316 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 LINC01465Q8N7H1 131 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 ACO2Q99798 780 aaKnown RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 COL25A1Q9BXS0 654 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 TSGA10Q9BZW7 698 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 INO80BQ9C086 356 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 FZD8Q9H461 694 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 PRMT7Q9NVM4 692 aaPredicted RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 MYO1AQ9UBC5 1043 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 AKT3Q9Y243 479 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 USP20Q9Y2K6 914 aa18.34■□□□□ 0.53
SREBF1-218ENST00000578469 REXO2Q9Y3B8 237 aaKnown RBP18.34■□□□□ 0.53
SREBF1-218ENST00000578469 KRT86O43790 486 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 ZEB2O60315 1214 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 IGHA2P01877 340 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 PLEKP08567 350 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 DLATP10515 647 aaKnown RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 AKR1A1P14550 325 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 CASQ1P31415 396 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 ATN1P54259 1190 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 JAM2P57087 298 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 CDC42EP1Q00587 391 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 ARID5AQ03989 594 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 PRPF4BQ13523 1007 aaKnown RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 HGSNATQ68CP4 663 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 VPS36Q86VN1 386 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 JAKMIP2Q96AA8 810 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 ZBTB45Q96K62 511 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 RBAKQ9NYW8 714 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-218ENST00000578469 COQ4Q9Y3A0 265 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 DNAH12Q6ZR08 3092 aa18.33■□□□□ 0.52
SREBF1-218ENST00000578469 NRCAMQ92823 1304 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 KPNA6O60684 536 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 F2P00734 622 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 SOX5P35711 763 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 PRKCIP41743 596 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 MAGEA1P43355 309 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 ACOT2P49753 483 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 VAV2P52735 878 aa18.32■□□□□ 0.52
SREBF1-218ENST00000578469 NLRP11P59045 1033 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms