RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 ATP2A2P16615 1042 aaKnown RBP15.11■□□□□ 0.01
LINC01543-201ENST00000578367 NR2F2P24468 414 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 MCCD1P59942 119 aaPredicted RBP15.11■□□□□ 0.01
LINC01543-201ENST00000578367 DPCR1Q3MIW9 517 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 ZSCAN23Q3MJ62 389 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 XKR4Q5GH76 650 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 PRPF38BQ5VTL8 546 aaKnown RBP15.11■□□□□ 0.01
LINC01543-201ENST00000578367 ISM2Q6H9L7 571 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 TTI2Q6NXR4 508 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.11■□□□□ 0.01
LINC01543-201ENST00000578367 ZBTB33Q86T24 672 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 TDHQ8IZJ6 230 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 BPIFA3Q9BQP9 254 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 CBWD1Q9BRT8 395 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 HAPLN2Q9GZV7 340 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 TMEM117Q9H0C3 514 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 RPF1Q9H9Y2 349 aaKnown RBP15.11■□□□□ 0.01
LINC01543-201ENST00000578367 RSAD1Q9HA92 442 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 DERAQ9Y315 318 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 INSL6Q9Y581 213 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 MYH11P35749 1972 aa15.11■□□□□ 0.01
LINC01543-201ENST00000578367 SIP14410 1827 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 EXOC3O60645 756 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 DGKIO75912 1065 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 HTRA4P83105 476 aaPredicted RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ADAM9Q13443 819 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 SHHQ15465 462 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ALKAL1Q6UXT8 129 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 AGMOQ6ZNB7 445 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 FILIP1Q7Z7B0 1213 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 CDR2LQ86X02 465 aaPredicted RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 HERC6Q8IVU3 1022 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 BRSK2Q8IWQ3 736 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 THNSL1Q8IYQ7 743 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 CMTR2Q8IYT2 770 aaKnown RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ABI1Q8IZP0 508 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ENOX1Q8TC92 643 aaKnown RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 NOC3LQ8WTT2 800 aaKnown RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 ZNF689Q96CS4 500 aaPredicted RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 RAD9AQ99638 391 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 FUCA2Q9BTY2 467 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 NXF3Q9H4D5 531 aaKnown RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
LINC01543-201ENST00000578367 CNTN3Q9P232 1028 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
LINC01543-201ENST00000578367 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 XPOTO43592 962 aaKnown RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 OFD1O75665 1012 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 RECQL4O94761 1208 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 KCNE1P15382 129 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 PSMC2P35998 433 aaKnown RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 DEFB103AP81534 67 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 SNRNP35Q16560 246 aaKnown RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 C9orf50Q5SZB4 431 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 KLHL10Q6JEL2 608 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 CRELD2Q6UXH1 353 aaPredicted RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 URGCPQ8TCY9 931 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 SNX27Q96L92 541 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 RC3H2Q9HBD1 1191 aaKnown RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 METTL14Q9HCE5 456 aaKnown RBP15.09■□□□□ 0.01
LINC01543-201ENST00000578367 SLC38A7Q9NVC3 462 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 SNTG2Q9NY99 539 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 C2CD2Q9Y426 696 aa15.09■□□□□ 0.01
LINC01543-201ENST00000578367 PDE4DIPQ5VU43 2346 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 TTC26A0AVF1 554 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 SYCE3A1L190 88 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 TISP43B9A030 160 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 CLIC2O15247 247 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 HARSP12081 509 aaKnown RBP15.08■□□□□ 0
LINC01543-201ENST00000578367 CYP2J2P51589 502 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 AP3M2P53677 418 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 PPP2R3AQ06190 1150 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 ENOX2Q16206 610 aaKnown RBP15.08■□□□□ 0
LINC01543-201ENST00000578367 NOMO2Q5JPE7 1267 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 INTS8Q75QN2 995 aaKnown RBP15.08■□□□□ 0
LINC01543-201ENST00000578367 CSGALNACT2Q8N6G5 542 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 TMC2Q8TDI7 906 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 MFSD14AQ96MC6 490 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 CASD1Q96PB1 797 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 RPS6KC1Q96S38 1066 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 FAM213AQ9BRX8 229 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 ZBED2Q9BTP6 218 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 IKZF4Q9H2S9 585 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 PCIF1Q9H4Z3 704 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 RNF19AQ9NV58 838 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 CTNND2Q9UQB3 1225 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 HES2Q9Y543 173 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 PCDHA11Q9Y5I1 949 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 TET1Q8NFU7 2136 aa15.08■□□□□ 0
LINC01543-201ENST00000578367 ARL5CA6NH57 179 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 IKBKBO14920 756 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 EPB41P11171 864 aaKnown RBP15.07■□□□□ 0
LINC01543-201ENST00000578367 CYP3A5P20815 502 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 PAX3P23760 479 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 AKAP5P24588 427 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 ACOT2P49753 483 aa15.07■□□□□ 0
LINC01543-201ENST00000578367 PMS1P54277 932 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms