RNA–Protein interactions for RNA: ENST00000578218.5

THRA-208, Transcript of thyroid hormone receptor alpha, human

TSL 4

Gene THRA, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
THRA-208	ENST00000578218	RPL17	P18621	184 aa	Known RBP	27.59	■■■□□ 2.01
THRA-208	ENST00000578218	AOC1	P19801	751 aa		27.59	■■■□□ 2.01
THRA-208	ENST00000578218	TUSC3	Q13454	348 aa		27.59	■■■□□ 2.01
THRA-208	ENST00000578218	CATSPER3	Q86XQ3	398 aa		27.59	■■■□□ 2.01
THRA-208	ENST00000578218	ZNF707	Q96C28	371 aa	Predicted RBP	27.59	■■■□□ 2.01
THRA-208	ENST00000578218	EPS15L1	Q9UBC2	864 aa		27.59	■■■□□ 2.01
THRA-208	ENST00000578218	DOCK8	Q8NF50	2099 aa		27.59	■■■□□ 2.01
THRA-208	ENST00000578218	ARHGEF35	A5YM69	484 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	PROB1	E7EW31	1015 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	CFH	P08603	1231 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	LIG1	P18858	919 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	PRPF4B	Q13523	1007 aa	Known RBP	27.58	■■■□□ 2.01
THRA-208	ENST00000578218	GPR65	Q8IYL9	337 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	RSAD2	Q8WXG1	361 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	NACC1	Q96RE7	527 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	MYADM	Q96S97	322 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	ADPGK	Q9BRR6	497 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	PDZD7	Q9H5P4	517 aa		27.58	■■■□□ 2.01
THRA-208	ENST00000578218	C1R	P00736	705 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	PRKCB	P05771	671 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	OR52Z1	P0C646	297 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	NBL1	P41271	181 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	ST3GAL1	Q11201	340 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	MAPK6	Q16659	721 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	FAM187B	Q17R55	369 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	PRSS55	Q6UWB4	352 aa	Predicted RBP	27.57	■■■□□ 2
THRA-208	ENST00000578218	DEPTOR	Q8TB45	409 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	RTP3	Q9BQQ7	232 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	PAAF1	Q9BRP4	392 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	POLR3C	Q9BUI4	534 aa	Predicted RBP	27.57	■■■□□ 2
THRA-208	ENST00000578218	NT5C3A	Q9H0P0	336 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	FZD8	Q9H461	694 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	SNTG2	Q9NY99	539 aa		27.57	■■■□□ 2
THRA-208	ENST00000578218	EIF5B	O60841	1220 aa	Known RBP	27.56	■■■□□ 2
THRA-208	ENST00000578218	RECQL4	O94761	1208 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	KIF4A	O95239	1232 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	NPR3	P17342	541 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	RTP2	Q5QGT7	225 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	HAUS3	Q68CZ6	603 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	PADI6	Q6TGC4	694 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	BSND	Q8WZ55	320 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	C8orf76	Q96K31	380 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	PRKD2	Q9BZL6	878 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	CFAP54	Q96N23	3096 aa		27.56	■■■□□ 2
THRA-208	ENST00000578218	PRR23A	A6NEV1	266 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	STK25	O00506	426 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	TH	P07101	528 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	LIN9	Q5TKA1	542 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	ASCL5	Q7RTU5	278 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	CEP57	Q86XR8	500 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	CCDC105	Q8IYK2	499 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	TTPAL	Q9BTX7	342 aa		27.55	■■■□□ 2
THRA-208	ENST00000578218	VWA8	A3KMH1	1905 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	TTLL13P	A6NNM8	815 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	PTGES	O14684	152 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	PI15	O43692	258 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	RPA1	P27694	616 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	NAMPT	P43490	491 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	ORC2	Q13416	577 aa	Predicted RBP	27.54	■■■□□ 2
THRA-208	ENST00000578218	GNL2	Q13823	731 aa	Known RBP	27.54	■■■□□ 2
THRA-208	ENST00000578218	PPP2R5A	Q15172	486 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	PSMD5	Q16401	504 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	FAM171A1	Q5VUB5	890 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	FRMD5	Q7Z6J6	570 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	NXPE3	Q969Y0	559 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	27.54	■■■□□ 2
THRA-208	ENST00000578218	FBXW11	Q9UKB1	542 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	CA14	Q9ULX7	337 aa		27.54	■■■□□ 2
THRA-208	ENST00000578218	ZMYND10	O75800	440 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	PAPLN	O95428	1278 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	SRF	P11831	508 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	ZNF174	Q15697	407 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	LILRA6	Q6PI73	481 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	NOSTRIN	Q8IVI9	506 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	CCDC83	Q8IWF9	413 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	CCDC113	Q9H0I3	377 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	WNT16	Q9UBV4	365 aa		27.53	■■■□□ 2
THRA-208	ENST00000578218	MYH15	Q9Y2K3	1946 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	CYP11B2	P19099	503 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	ELAVL2	Q12926	359 aa	Known RBP	27.52	■■■□□ 2
THRA-208	ENST00000578218	DCAF4L1	Q3SXM0	396 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	DTWD2	Q8NBA8	298 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	PIK3R5	Q8WYR1	880 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	NKD2	Q969F2	451 aa	Predicted RBP	27.52	■■■□□ 2
THRA-208	ENST00000578218	IFT74	Q96LB3	600 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	KIFC3	Q9BVG8	833 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	PPP4R2	Q9NY27	417 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	USP20	Q9Y2K6	914 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	GDA	Q9Y2T3	454 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	VPS13A	Q96RL7	3174 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	DMD	P11532	3685 aa		27.52	■■■□□ 2
THRA-208	ENST00000578218	ZFHX2	Q9C0A1	2572 aa	Predicted RBP	27.52	■■■□□ 2
THRA-208	ENST00000578218	ACKR2	O00590	384 aa		27.51	■■□□□ 1.99
THRA-208	ENST00000578218	ANGPT1	Q15389	498 aa		27.51	■■□□□ 1.99
THRA-208	ENST00000578218	TTC38	Q5R3I4	469 aa		27.51	■■□□□ 1.99
THRA-208	ENST00000578218	SLC44A3	Q8N4M1	653 aa		27.51	■■□□□ 1.99
THRA-208	ENST00000578218	FOXP1	Q9H334	677 aa	Predicted RBP	27.51	■■□□□ 1.99
THRA-208	ENST00000578218	KRBA1	A5PL33	1030 aa		27.5	■■□□□ 1.99
THRA-208	ENST00000578218	EDN1	P05305	212 aa		27.5	■■□□□ 1.99
THRA-208	ENST00000578218	C8A	P07357	584 aa		27.5	■■□□□ 1.99

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