RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	CBWD2	Q8IUF1	395 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	SLC9A9	Q8IVB4	645 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	XXYLT1	Q8NBI6	393 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	PGBD4	Q96DM1	585 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	ACAP3	Q96P50	834 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	GDF15	Q99988	308 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	UBE2O	Q9C0C9	1292 aa	Known RBP	10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	CXCL16	Q9H2A7	254 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	TSPY26P	Q9H489	355 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	KLK14	Q9P0G3	267 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	CPSF3	Q9UKF6	684 aa	Known RBP	10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	LRFN2	Q9ULH4	789 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	PCDHB7	Q9Y5E2	793 aa		10.84	□□□□□ -0.67
SPOP-222	ENST00000577134	MKI67	P46013	3256 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	KIAA0391	O15091	583 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CETN3	O15182	167 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	MEFV	O15553	781 aa	Predicted RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	RECQL4	O94761	1208 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	EOMES	O95936	686 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	LDHA	P00338	332 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CXCL8	P10145	99 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ZNF165	P49910	485 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	FKBP3	Q00688	224 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	MYBPC2	Q14324	1141 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	SHH	Q15465	462 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	SLC10A6	Q3KNW5	377 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	SPATA1	Q5VX52	437 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CEP135	Q66GS9	1140 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	FAM117B	Q6P1L5	589 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	AGMO	Q6ZNB7	445 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	LRRC55	Q6ZSA7	311 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ZC3H3	Q8IXZ2	948 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CRIPAK	Q8N1N5	446 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CSGALNACT2	Q8N6G5	542 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ENOX1	Q8TC92	643 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	TMEM174	Q8WUU8	243 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	TOP1MT	Q969P6	601 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	FAM212A	Q96EL1	285 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	FBXL18	Q96ME1	805 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	CCDC94	Q9BW85	323 aa	Predicted RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	SRRT	Q9BXP5	876 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	NAT10	Q9H0A0	1025 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ELAC1	Q9H777	363 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	RPF1	Q9H9Y2	349 aa	Known RBP	10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	RNF19A	Q9NV58	838 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	TMEM161A	Q9NX61	479 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	TTC3	P53804	2025 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	TRIP11	Q15643	1979 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ANK1	P16157	1881 aa		10.83	□□□□□ -0.68
SPOP-222	ENST00000577134	ZNF233	A6NK53	670 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	LACTBL1	A8MY62	500 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	OFD1	O75665	1012 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	AKAP3	O75969	853 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	ADRB2	P07550	413 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	CLTA	P09496	248 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	FGFR1	P11362	822 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	PSMC2	P35998	433 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	GATM	P50440	423 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	YARS	P54577	528 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	WNT7B	P56706	349 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	SPAG1	Q07617	926 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	ENOX2	Q16206	610 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	SNRNP35	Q16560	246 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	KYAT1	Q16773	422 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	TPD52L1	Q16890	204 aa	Predicted RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	CLLU1OS	Q5K130	101 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	RASIP1	Q5U651	963 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	FOXR2	Q6PJQ5	311 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	FILIP1	Q7Z7B0	1213 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	NPAS4	Q8IUM7	802 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	DHX40	Q8IX18	779 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	HACE1	Q8IYU2	909 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	AOPEP	Q8N6M6	819 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	HELQ	Q8TDG4	1101 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	RNPC3	Q96LT9	517 aa	Known RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	CEP63	Q96MT8	703 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	GAD1	Q99259	594 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	BPIFA3	Q9BQP9	254 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	RSAD1	Q9HA92	442 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	KIAA1586	Q9HCI6	787 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	MIOS	Q9NXC5	875 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	RBAK	Q9NYW8	714 aa	Predicted RBP	10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	FRMD4B	Q9Y2L6	1034 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	GIT1	Q9Y2X7	761 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	SLC4A7	Q9Y6M7	1214 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	CIT	O14578	2027 aa		10.82	□□□□□ -0.68
SPOP-222	ENST00000577134	RALGAPA2	Q2PPJ7	1873 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	ARL5C	A6NH57	179 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	SLC16A3	O15427	465 aa	Known RBP	10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	FGFR1OP	O95684	399 aa	Known RBP	10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	EPB41	P11171	864 aa	Known RBP	10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	MLH1	P40692	756 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	AFF1	P51825	1210 aa	Known RBP	10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	MYL5	Q02045	173 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	CYP24A1	Q07973	514 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	NCAPH	Q15003	741 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	IQCB1	Q15051	598 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	HSP90AA4P	Q58FG1	418 aa		10.81	□□□□□ -0.68
SPOP-222	ENST00000577134	ALKAL1	Q6UXT8	129 aa		10.81	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms