RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 ZC3H3Q8IXZ2 948 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 THNSL1Q8IYQ7 743 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 GPD1LQ8N335 351 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 CSGALNACT2Q8N6G5 542 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 CEP120Q8N960 986 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 XXYLT1Q8NBI6 393 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 SMG8Q8ND04 991 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 SAAL1Q96ER3 474 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 EEF2KMTQ96G04 330 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 BPIFA3Q9BQP9 254 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 FAM213AQ9BRX8 229 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 TSPY26PQ9H489 355 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 NXF3Q9H4D5 531 aaKnown RBP9.31□□□□□ -0.92
PRPF8-213ENST00000576407 C1orf112Q9NSG2 853 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 DMAC2Q9NW81 257 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 HES2Q9Y543 173 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 IPPQ9Y573 584 aa9.31□□□□□ -0.92
PRPF8-213ENST00000576407 H0YGN5 161 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CETN3O15182 167 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 EFCAB14O75071 495 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 BAIAP3O94812 1187 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CAVIN2O95810 425 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 LDHAP00338 332 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 STAG3L1P0CL83 205 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 SKIP12755 728 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 ATF7P17544 494 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 IBSPP21815 317 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 GRM5P41594 1212 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CASP4P49662 377 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 ACOT2P49753 483 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 MYL5Q02045 173 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 TMEM240Q5SV17 173 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 SPATA1Q5VX52 437 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 PSRC1Q6PGN9 363 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CRELD2Q6UXH1 353 aaPredicted RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.3□□□□□ -0.923e-6■■■□□ 16.2
PRPF8-213ENST00000576407 OTOP2Q7RTS6 562 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 MRPL10Q7Z7H8 261 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 ECHDC2Q86YB7 292 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CBWD2Q8IUF1 395 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 DHX40Q8IX18 779 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 TMEM192Q8IY95 271 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 AOPEPQ8N6M6 819 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 RDH13Q8NBN7 331 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 ENOX1Q8TC92 643 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 NOC3LQ8WTT2 800 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 FBXL18Q96ME1 805 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.3□□□□□ -0.925e-10■□□□□ 9.3
PRPF8-213ENST00000576407 APOL6Q9BWW8 343 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 SRRTQ9BXP5 876 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 RNF39Q9H2S5 420 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 KIAA1586Q9HCI6 787 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 SNTG2Q9NY99 539 aa9.3□□□□□ -0.92
PRPF8-213ENST00000576407 CPSF3Q9UKF6 684 aaKnown RBP9.3□□□□□ -0.92
PRPF8-213ENST00000576407 MICAL3Q7RTP6 2002 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF233A6NK53 670 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 MEIS3P2A8K0S8 358 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 IKBKBO14920 756 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 AKAP3O75969 853 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 RECQL4O94761 1208 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 EOMESO95936 686 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ADRB2P07550 413 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CLTAP09496 248 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ITGA4P13612 1032 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 AKAP5P24588 427 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 PSMC2P35998 433 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 WDR5P61964 334 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 NCAPHQ15003 741 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 IQCB1Q15051 598 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ENOX2Q16206 610 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 SNRNP35Q16560 246 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 KYAT1Q16773 422 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 TPD52L1Q16890 204 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 AGMOQ6ZNB7 445 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ZNF598Q86UK7 904 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 HACE1Q8IYU2 909 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CRIPAKQ8N1N5 446 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 RNF169Q8NCN4 708 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 FAM200AQ8TCP9 573 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 HERVK_113Q902F9 699 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 LPPQ93052 612 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 PGBD4Q96DM1 585 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CEP63Q96MT8 703 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ACAP3Q96P50 834 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 MKNK1Q9BUB5 465 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CCDC94Q9BW85 323 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ELAC1Q9H777 363 aaKnown RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CBX8Q9HC52 389 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 TMEM161AQ9NX61 479 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 RBAKQ9NYW8 714 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 CXXC1Q9P0U4 656 aaPredicted RBP9.29□□□□□ -0.92
PRPF8-213ENST00000576407 PARP2Q9UGN5 583 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 FRMD4BQ9Y2L6 1034 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 NFE2L3Q9Y4A8 694 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 PCDHB7Q9Y5E2 793 aa9.29□□□□□ -0.92
PRPF8-213ENST00000576407 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 MAPK13O15264 365 aa9.28□□□□□ -0.92
PRPF8-213ENST00000576407 SLC16A3O15427 465 aaKnown RBP9.28□□□□□ -0.92
PRPF8-213ENST00000576407 MEFVO15553 781 aaPredicted RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms