RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 ENDOD1O94919 500 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 MT-CO1P00395 513 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 AMY1AP04745 511 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 MYBL2P10244 700 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 GNAT2P19087 354 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 IBSPP21815 317 aaPredicted RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 ADSLP30566 484 aaPredicted RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 ADKP55263 362 aaKnown RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 CCT2P78371 535 aaKnown RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 FNDC7Q5VTL7 733 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 RHOUQ7L0Q8 258 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 SYT12Q8IV01 421 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 C1orf210Q8IVY1 113 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 REPS2Q8NFH8 660 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 MDM1Q8TC05 714 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 NRG4Q8WWG1 115 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 ATXN2LQ8WWM7 1075 aaKnown RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 MTMR8Q96EF0 704 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 ADI1Q9BV57 179 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 MKS1Q9NXB0 559 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 DDX56Q9NY93 547 aaKnown RBP4.42□□□□□ -1.7
CDC27-218ENST00000575830 CHST2Q9Y4C5 530 aa4.42□□□□□ -1.7
CDC27-218ENST00000575830 GOLGA6L6A8MZA4 724 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 TRIM24O15164 1050 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 HTRA2O43464 458 aaPredicted RBP4.41□□□□□ -1.7
CDC27-218ENST00000575830 SGTAO43765 313 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 C1SP09871 688 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 ZFP36P26651 326 aaKnown RBP4.41□□□□□ -1.7
CDC27-218ENST00000575830 PTTG1IPP53801 180 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 MTM1Q13496 603 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 SEM1Q6ZVN7 128 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 CMTR2Q8IYT2 770 aaKnown RBP4.41□□□□□ -1.7
CDC27-218ENST00000575830 PQLC1Q8N2U9 271 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 PRR18Q8N4B5 295 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.41□□□□□ -1.7
CDC27-218ENST00000575830 SLC35B2Q8TB61 432 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 CHMP4CQ96CF2 233 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 DMRTA2Q96SC8 542 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 CPPED1Q9BRF8 314 aaPredicted RBP4.41□□□□□ -1.7
CDC27-218ENST00000575830 NDC1Q9BTX1 674 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 GPR87Q9BY21 358 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 LIMCH1Q9UPQ0 1083 aa4.41□□□□□ -1.7
CDC27-218ENST00000575830 AHRRA9YTQ3 701 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 PDGFRBP09619 1106 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 IL2RBP14784 551 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 ZSCAN20P17040 1043 aaPredicted RBP4.4□□□□□ -1.71
CDC27-218ENST00000575830 NCLP19338 710 aaKnown RBP4.4□□□□□ -1.71
CDC27-218ENST00000575830 NR4A1P22736 598 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 PCSK1P29120 753 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 ACVRL1P37023 503 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 RECQLP46063 649 aaPredicted RBP4.4□□□□□ -1.71
CDC27-218ENST00000575830 PUM1Q14671 1186 aaKnown RBP eCLIP4.4□□□□□ -1.71
CDC27-218ENST00000575830 NOMO1Q15155 1222 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 NRN1LQ496H8 165 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 RABL3Q5HYI8 236 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 FAM102AQ5T9C2 384 aaPredicted RBP4.4□□□□□ -1.71
CDC27-218ENST00000575830 XYLT1Q86Y38 959 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 ZGPATQ8N5A5 531 aaKnown RBP4.4□□□□□ -1.71
CDC27-218ENST00000575830 LENG9Q96B70 501 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 MRGPRX4Q96LA9 322 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 LANCL2Q9NS86 450 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 GPRC5BQ9NZH0 403 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 SLC23A1Q9UHI7 598 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 MRFAP1Q9Y605 127 aa4.4□□□□□ -1.71
CDC27-218ENST00000575830 hCG_2014768A0A024R1R8 64 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 DIRC3C9JPN6 131 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 NARSO43776 548 aaKnown RBP4.39□□□□□ -1.71
CDC27-218ENST00000575830 ABLIM3O94929 683 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 AMHP03971 560 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 SNRPA1P09661 255 aaKnown RBP4.39□□□□□ -1.71
CDC27-218ENST00000575830 HSP90B1P14625 803 aaKnown RBP4.39□□□□□ -1.71
CDC27-218ENST00000575830 NEK2P51955 445 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 CLRN1P58418 232 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 IGBP1P78318 339 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 CDC42EP1Q00587 391 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 DSC2Q02487 901 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 MCL1Q07820 350 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 TARDBPQ13148 414 aaKnown RBP eCLIP4.39□□□□□ -1.71
CDC27-218ENST00000575830 CNGB1Q14028 1251 aaPredicted RBP4.39□□□□□ -1.71
CDC27-218ENST00000575830 DACT2Q5SW24 774 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 EFCAB2Q5VUJ9 269 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 IGFL4Q6B9Z1 124 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 CPA6Q8N4T0 437 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 DPF2Q92785 391 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 CAMKK2Q96RR4 588 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 MANSC1Q9H8J5 431 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 PARPBPQ9NWS1 579 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 PCDHB1Q9Y5F3 818 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 HS3ST4Q9Y661 456 aa4.39□□□□□ -1.71
CDC27-218ENST00000575830 MARCH11A6NNE9 402 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 PRR5-ARHGAP8B1AHC4 643 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 LEFTY2O00292 366 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 HK1P19367 917 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 TACR2P21452 398 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 FPR1P21462 350 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 MGAT1P26572 445 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 PTPN7P35236 360 aa4.38□□□□□ -1.71
CDC27-218ENST00000575830 FXR1P51114 621 aaKnown RBP eCLIP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms