RNA–Protein interactions for RNA: ENST00000575709.5

USP6-206, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 2

Gene USP6, Length 8,185 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-206ENST00000575709 MAN2A1Q16706 1144 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 THEMIS2Q5TEJ8 643 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 SNX30Q5VWJ9 437 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 SH2D3CQ8N5H7 860 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 APOL4Q9BPW4 351 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 KLHL3Q9UH77 587 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 CHKBQ9Y259 395 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 CPA2P48052 419 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 RPS7P62081 194 aaKnown RBP11.09□□□□□ -0.63
USP6-206ENST00000575709 PKP1Q13835 747 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 COPS6Q7L5N1 327 aa11.09□□□□□ -0.63
USP6-206ENST00000575709 FRMPD2Q68DX3 1309 aaPredicted RBP11.08□□□□□ -0.63
USP6-206ENST00000575709 STMND1H3BQB6 276 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 HNRNPDLO14979 420 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 SSNA1O43805 119 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SERPIND1P05546 499 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 OR52Z1P0C646 297 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 CD58P19256 250 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 PPP3CCP48454 512 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 EIF3EP60228 445 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 OR6B2Q6IFH4 312 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 ERICH5Q6P6B1 374 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 LRRC8DQ7L1W4 858 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 CROCCP3Q8IVE0 287 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SUCLG2Q96I99 432 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 PCIF1Q9H4Z3 704 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.08□□□□□ -0.64
USP6-206ENST00000575709 MLXQ9UH92 298 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MAFFQ9ULX9 164 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SLC8A2Q9UPR5 921 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 THRAP3Q9Y2W1 955 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 GNB5O14775 395 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 PPIP5K2O43314 1243 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MPP2Q14168 576 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 FUT11Q495W5 492 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 RDM1Q8NG50 284 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 FAM172AQ8WUF8 416 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 UBXN6Q9BZV1 441 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 C12orf4Q9NQ89 552 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MAN1B1Q9UKM7 699 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 PTGDRQ13258 359 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SPANXN2Q5MJ10 180 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 TYW3Q6IPR3 259 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 NECAB2Q7Z6G3 386 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 TTC30AQ86WT1 665 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 RANBP17Q9H2T7 1088 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 LRRC4Q9HBW1 653 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 KLHL41O60662 606 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MAGEA10P43363 369 aaPredicted RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 OLFML2AQ68BL7 652 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 NUDT16Q96DE0 195 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 SIPA1Q96FS4 1042 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 NLRP3Q96P20 1036 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 KIAA1024Q9UPX6 916 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 RBMX2Q9Y388 322 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 MAP3K13O43283 966 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 PPP1R37O75864 691 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MLNP12872 115 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 ZNF23P17027 643 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 LSP1P33241 339 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 CUL4AQ13619 759 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 ODR4Q5SWX8 454 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 THOC7Q6I9Y2 204 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 DNAJC7Q99615 494 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 TMEM79Q9BSE2 394 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MOV10L1Q9BXT6 1211 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 TELO2Q9Y4R8 837 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 EMILIN1Q9Y6C2 1016 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 CCT8L1PA6NM43 557 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SOAT1P35610 550 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 HSPA2P54652 639 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 NDUFAF6Q330K2 333 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 FAM47CQ5HY64 1035 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 MEI1Q5TIA1 1274 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 SULT1C3Q6IMI6 304 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 VSTM4Q8IW00 320 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 DBR1Q9UK59 544 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 CCDC182A6NF36 153 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 E9PBE3 544 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 TPST1O60507 370 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 ATP9AO75110 1047 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 KLHL2O95198 593 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 FAM26FQ5R3K3 315 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 BLIDQ8IZY5 108 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 NDUFAF2Q8N183 169 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 NSL1Q96IY1 281 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 WNK4Q96J92 1243 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.64
USP6-206ENST00000575709 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 TRABDQ9H4I3 376 aa11.08□□□□□ -0.64
USP6-206ENST00000575709 IQCMA0A1B0GVH7 501 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 ECE2O60344 883 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 CHRNA3P32297 505 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 KIAA1755Q5JYT7 1200 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 KRT78Q8N1N4 520 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 ATP11CQ8NB49 1132 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 ROGDIQ9GZN7 287 aa11.07□□□□□ -0.64
USP6-206ENST00000575709 SAMSN1Q9NSI8 373 aaKnown RBP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms