RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ATG4AQ8WYN0 398 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 RBM41Q96IZ5 413 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 C9orf72Q96LT7 481 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 MIPEPQ99797 713 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 TYW1Q9NV66 732 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 LRCH1Q9Y2L9 728 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 FAM47DPA6NHR8 397 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 DCTN3O75935 186 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 KRT36O76013 467 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 RASSF2P50749 326 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 EIF6P56537 245 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 PARP10Q53GL7 1025 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 C11orf63Q6NUN7 778 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 RHBDF2Q6PJF5 856 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 FAM186BQ8IYM0 893 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 FBXO41Q8TF61 875 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 DDX50Q9BQ39 737 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 UBE2OQ9C0C9 1292 aaKnown RBP15.39■□□□□ 0.05
SMG6-215ENST00000574501 GRID1Q9ULK0 1009 aa15.39■□□□□ 0.05
SMG6-215ENST00000574501 GTPBP10A4D1E9 387 aaKnown RBP15.38■□□□□ 0.05
SMG6-215ENST00000574501 SPOPO43791 374 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 GGPS1O95749 300 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 SERPINB4P48594 390 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 FMO5P49326 533 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 ERFEQ4G0M1 354 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 C4orf50Q6ZRC1 276 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 CATSPER3Q86XQ3 398 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 KIAA0825Q8IV33 1275 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 AGPAT1Q99943 283 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 RUSC1Q9BVN2 902 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 ADAM33Q9BZ11 813 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 LMCD1Q9NZU5 365 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 WHRNQ9P202 907 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 NUMBLQ9Y6R0 609 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 SLC16A3O15427 465 aaKnown RBP15.38■□□□□ 0.05
SMG6-215ENST00000574501 CDH16O75309 829 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 CAMTA2O94983 1202 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 ASMTLO95671 621 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 SKIP12755 728 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 PTPN4P29074 926 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 COG2Q14746 738 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 MTDHQ86UE4 582 aaKnown RBP15.38■□□□□ 0.05
SMG6-215ENST00000574501 LRRC47Q8N1G4 583 aaKnown RBP15.38■□□□□ 0.05
SMG6-215ENST00000574501 OCEL1Q9H607 264 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 ZFP69BQ9UJL9 534 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 ROBO3Q96MS0 1386 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 SCN7AQ01118 1682 aa15.38■□□□□ 0.05
SMG6-215ENST00000574501 CAPN9O14815 690 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 PPP1R11O60927 126 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 UBTFL6P0CB48 400 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 CDR2Q01850 454 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 GRIK5Q16478 980 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 CERKLQ49MI3 558 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 LRRC23Q53EV4 343 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 SGO2Q562F6 1265 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 ANKRD35Q8N283 1001 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 FAM81AQ8TBF8 368 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 C10orf82Q8WW14 230 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 MAIP1Q8WWC4 291 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 TRAPPC9Q96Q05 1148 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 CADM1Q9BY67 442 aaKnown RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 INTS2Q9H0H0 1204 aaKnown RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 CHST7Q9NS84 486 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 TGFB1I1O43294 461 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 LMNAP02545 664 aaKnown RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 ITIH2P19823 946 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 POLD1P28340 1107 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 GPC5P78333 572 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 KPNB1Q14974 876 aaKnown RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 PHLDB3Q6NSJ2 640 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 SPIRE2Q8WWL2 714 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 SNF8Q96H20 258 aa15.37■□□□□ 0.05
SMG6-215ENST00000574501 TMX4Q9H1E5 349 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 ZBTB12Q9Y330 459 aaPredicted RBP15.37■□□□□ 0.05
SMG6-215ENST00000574501 ZCCHC18P0CG32 403 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 PYGBP11216 843 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 GSTT1P30711 240 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 ACSBG2Q5FVE4 666 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 CYP4F22Q6NT55 531 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 INTS5Q6P9B9 1019 aaKnown RBP15.36■□□□□ 0.05
SMG6-215ENST00000574501 LRRC74BQ6ZQY2 392 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 CCDC125Q86Z20 511 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 CLEC10AQ8IUN9 316 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 C4orf33Q8N1A6 199 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 NEDD1Q8NHV4 660 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 CD101Q93033 1021 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 BICD1Q96G01 975 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 FAM210AQ96ND0 272 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 GBP5Q96PP8 586 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 MXD3Q9BW11 206 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 WNT8AQ9H1J5 351 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 LRRC19Q9H756 370 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 UBN1Q9NPG3 1134 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.36■□□□□ 0.051e-7■■■■■ 115.4
SMG6-215ENST00000574501 APEX2Q9UBZ4 518 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 LGALS13Q9UHV8 139 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 ANAPC5Q9UJX4 755 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 FRMPD4Q14CM0 1322 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 SNED1Q8TER0 1413 aa15.36■□□□□ 0.05
SMG6-215ENST00000574501 USP17L15C9J2P7 530 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms