RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 STRN3Q13033 797 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 NAB2Q15742 525 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 MPZL3Q6UWV2 235 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 TMC7Q7Z402 723 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 DDX53Q86TM3 631 aaKnown RBP30.44■■■□□ 2.46
SCARF1-207ENST00000573867 VPS52Q8N1B4 723 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 ZBP1Q9H171 429 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 CFAP45Q9UL16 551 aa30.44■■■□□ 2.46
SCARF1-207ENST00000573867 MEFVO15553 781 aaPredicted RBP30.43■■■□□ 2.46
SCARF1-207ENST00000573867 TBX10O75333 385 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 GLP2RO95838 553 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 GRM5P41594 1212 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 ME1P48163 572 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 RBM10P98175 930 aaKnown RBP30.43■■■□□ 2.46
SCARF1-207ENST00000573867 ADAM15Q13444 863 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 PDE12Q6L8Q7 609 aaKnown RBP30.43■■■□□ 2.46
SCARF1-207ENST00000573867 EP400NLQ6ZTU2 488 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 SFR1Q86XK3 245 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 VN1R2Q8NFZ6 395 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 AUTS2Q8WXX7 1259 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 RABGGTAQ92696 567 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 STAMQ92783 540 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 RPS6KC1Q96S38 1066 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 TLE6Q9H808 572 aa30.43■■■□□ 2.46
SCARF1-207ENST00000573867 MCF2P10911 925 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 HARSP12081 509 aaKnown RBP30.42■■■□□ 2.46
SCARF1-207ENST00000573867 OSTNP61366 133 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 DUSP6Q16828 381 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 ZPBP2Q6X784 338 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 FAM178BQ8IXR5 827 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 EFHBQ8N7U6 833 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 GADD45GIP1Q8TAE8 222 aaPredicted RBP30.42■■■□□ 2.46
SCARF1-207ENST00000573867 PAAF1Q9BRP4 392 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 NGRNQ9NPE2 291 aaKnown RBP30.42■■■□□ 2.46
SCARF1-207ENST00000573867 TBX20Q9UMR3 447 aa30.42■■■□□ 2.46
SCARF1-207ENST00000573867 CARNS1A5YM72 827 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 H0YCG3 227 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 TOM1L1O75674 476 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 EFEMP2O95967 443 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 AAK1Q2M2I8 961 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 LEXMQ3ZCV2 418 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 ZC2HC1CQ53FD0 456 aaPredicted RBP30.41■■■□□ 2.46
SCARF1-207ENST00000573867 MRPL43Q8N983 215 aaKnown RBP30.41■■■□□ 2.46
SCARF1-207ENST00000573867 PPP2R3CQ969Q6 453 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 DHX58Q96C10 678 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 ANKFY1Q9P2R3 1169 aa30.41■■■□□ 2.46
SCARF1-207ENST00000573867 C2orf71A6NGG8 1288 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 NCK2O43639 380 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 GTF2BQ00403 316 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 SMC1AQ14683 1233 aaKnown RBP30.4■■■□□ 2.46
SCARF1-207ENST00000573867 SEZ6Q53EL9 994 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 GLRA4Q5JXX5 417 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 RESP18Q5W5W9 173 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 LEO1Q8WVC0 666 aaPredicted RBP30.4■■■□□ 2.46
SCARF1-207ENST00000573867 TCHPQ9BT92 498 aa30.4■■■□□ 2.46
SCARF1-207ENST00000573867 PIGRP01833 764 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 CTSAP10619 480 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 MCL1Q07820 350 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 NOLC1Q14978 699 aaKnown RBP eCLIP30.39■■■□□ 2.46
SCARF1-207ENST00000573867 SLC39A4Q6P5W5 647 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 TAS1R1Q7RTX1 841 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 APBB1IPQ7Z5R6 666 aaPredicted RBP30.39■■■□□ 2.46
SCARF1-207ENST00000573867 RNF168Q8IYW5 571 aaPredicted RBP30.39■■■□□ 2.46
SCARF1-207ENST00000573867 IKZF4Q9H2S9 585 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 KBTBD4Q9NVX7 518 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 CLEC1BQ9P126 229 aa30.39■■■□□ 2.46
SCARF1-207ENST00000573867 FRMD3A2A2Y4 597 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 CASTOR2A6NHX0 329 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 CXCL14O95715 111 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 THP07101 528 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 TUSC3Q13454 348 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 KCNC3Q14003 757 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 XKR4Q5GH76 650 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 ALKAL1Q6UXT8 129 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 MAP4K3Q8IVH8 894 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 BICD1Q96G01 975 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 PPP1R10Q96QC0 940 aaKnown RBP30.38■■■□□ 2.45
SCARF1-207ENST00000573867 CCDC94Q9BW85 323 aaPredicted RBP30.38■■■□□ 2.45
SCARF1-207ENST00000573867 STRA6Q9BX79 667 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 FGFBP2Q9BYJ0 223 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 ST6GALNAC4Q9H4F1 302 aa30.38■■■□□ 2.45
SCARF1-207ENST00000573867 PPP1R37O75864 691 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 CLUL1Q15846 466 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 ZNF720Q7Z2F6 126 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 SNX27Q96L92 541 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 NECAB3Q96P71 396 aaPredicted RBP30.37■■■□□ 2.45
SCARF1-207ENST00000573867 TNMDQ9H2S6 317 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 TBC1D7Q9P0N9 293 aa30.37■■■□□ 2.45
SCARF1-207ENST00000573867 BARX2Q9UMQ3 279 aaPredicted RBP30.37■■■□□ 2.45
SCARF1-207ENST00000573867 DLL1O00548 723 aa30.36■■■□□ 2.45
SCARF1-207ENST00000573867 POLR2DO15514 142 aaKnown RBP30.36■■■□□ 2.45
SCARF1-207ENST00000573867 IGFBP6P24592 240 aaPredicted RBP30.36■■■□□ 2.45
SCARF1-207ENST00000573867 KRT85P78386 507 aa30.36■■■□□ 2.45
SCARF1-207ENST00000573867 PTPN14Q15678 1187 aa30.36■■■□□ 2.45
SCARF1-207ENST00000573867 ADAMTS19Q8TE59 1207 aa30.36■■■□□ 2.45
SCARF1-207ENST00000573867 MSLNLQ96KJ4 702 aa30.36■■■□□ 2.45
SCARF1-207ENST00000573867 ZMAT2Q96NC0 199 aaKnown RBP30.36■■■□□ 2.45
SCARF1-207ENST00000573867 CDCA3Q99618 268 aaPredicted RBP30.36■■■□□ 2.45
SCARF1-207ENST00000573867 TCF20Q9UGU0 1960 aaKnown RBP30.35■■■□□ 2.45
SCARF1-207ENST00000573867 MUC3AQ02505 3323 aa30.35■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms