RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 PARP2Q9UGN5 583 aa13.58□□□□□ -0.24
PRPF8-208ENST00000573716 ARID2Q68CP9 1835 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 DKC1O60832 514 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 PAPLNO95428 1278 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 NPTXRO95502 500 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 C1RP00736 705 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 ADRB1P08588 477 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 KRT32Q14532 448 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 PSMD5Q16401 504 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 XKR9Q5GH70 373 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 FAM171A1Q5VUB5 890 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 B3GNT9Q6UX72 402 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 PRR23BQ6ZRT6 265 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 FERMT3Q86UX7 667 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 CDR2LQ86X02 465 aaPredicted RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 SLC7A14Q8TBB6 771 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 ETNPPLQ8TBG4 499 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 CCDC51Q96ER9 411 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 YTHDC1Q96MU7 727 aaKnown RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 MBOAT7Q96N66 472 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 DHX33Q9H6R0 707 aaKnown RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 HCFC1R1Q9NWW0 138 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 DDX25Q9UHL0 483 aaKnown RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 NDRG2Q9UN36 371 aaKnown RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 GIT1Q9Y2X7 761 aa13.57□□□□□ -0.24
PRPF8-208ENST00000573716 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 SF3B1O75533 1304 aaKnown RBP eCLIP13.57□□□□□ -0.24
PRPF8-208ENST00000573716 ASAP2O43150 1006 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 LILRB5O75023 590 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 HMGB1P09429 215 aaKnown RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 AXLP30530 894 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 GRIK3Q13003 919 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 MTAPQ13126 283 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 HSP90AA2PQ14568 343 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 PABPC1LQ4VXU2 614 aaKnown RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 RSPO2Q6UXX9 243 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 ZNF852Q6ZMS4 543 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 MCRS1Q96EZ8 462 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 NELL2Q99435 816 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 CLSTN3Q9BQT9 956 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 TTPALQ9BTX7 342 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 RNF26Q9BY78 433 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 C22orf23Q9BZE7 217 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 HEBP1Q9NRV9 189 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 WRAP73Q9P2S5 460 aaPredicted RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
PRPF8-208ENST00000573716 USP24Q9UPU5 2620 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 RALGAPA1Q6GYQ0 2036 aa13.56□□□□□ -0.24
PRPF8-208ENST00000573716 CYP3A7-CYP3A51PA0A087WV96 503 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 CASTOR2A6NHX0 329 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 ADAM12O43184 909 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 SLC37A4O43826 429 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 MARCH6O60337 910 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 P4HBP07237 508 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 TGM1P22735 817 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 CYP3A7P24462 503 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 YWHABP31946 246 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 CCT2P78371 535 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 TFDP1Q14186 410 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 AXDND1Q5T1B0 1012 aaPredicted RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 NPAS3Q8IXF0 933 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 GPR65Q8IYL9 337 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 CLDN23Q96B33 292 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 MTRQ99707 1265 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 PAAF1Q9BRP4 392 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 LXNQ9BS40 222 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 NCOA5Q9HCD5 579 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 PCDHA4Q9UN74 947 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 MRPS23Q9Y3D9 190 aaKnown RBP13.55□□□□□ -0.24
PRPF8-208ENST00000573716 CHD6Q8TD26 2715 aa13.55□□□□□ -0.24
PRPF8-208ENST00000573716 ZBTB39O15060 712 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 B4GALT5O43286 388 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 ARF4P18085 180 aaPredicted RBP13.54□□□□□ -0.24
PRPF8-208ENST00000573716 RPS9P46781 194 aaKnown RBP13.54□□□□□ -0.24
PRPF8-208ENST00000573716 PTENP60484 403 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 CYP4A11Q02928 519 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 ADCY1Q08828 1119 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 INF2Q27J81 1249 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 NCAPH2Q6IBW4 605 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 BLIDQ8IZY5 108 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 GSTCDQ8NEC7 633 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 NETO1Q8TDF5 533 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 PIK3R5Q8WYR1 880 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 PLA2G2FQ9BZM2 168 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 PRMT8Q9NR22 394 aaPredicted RBP13.54□□□□□ -0.24
PRPF8-208ENST00000573716 SH3GLB2Q9NR46 395 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 RGL1Q9NZL6 768 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 VAV3Q9UKW4 847 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 PPME1Q9Y570 386 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 NOTCH4Q99466 2003 aa13.54□□□□□ -0.24
PRPF8-208ENST00000573716 KIF4AO95239 1232 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 IFNAR1P17181 557 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 HOXA9P31269 272 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 OR1D2P34982 312 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 NRLP54845 237 aa13.53□□□□□ -0.24
PRPF8-208ENST00000573716 IRX6P78412 446 aaPredicted RBP13.53□□□□□ -0.24
PRPF8-208ENST00000573716 MBTD1Q05BQ5 628 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms