RNA–Protein interactions for RNA: ENST00000573600.5

CTDNEP1-208, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTDNEP1, Length 1,724 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-208ENST00000573600 REM2Q8IYK8 340 aaPredicted RBP31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 FAM81BQ96LP2 452 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 NT5C1BQ96P26 610 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 IFT122Q9HBG6 1241 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 TFR2Q9UP52 801 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 A0A087X0T9 212 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 TTLL13PA6NNM8 815 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 FAM228BP0C875 321 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 BMS1Q14692 1282 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 MARCH8Q5T0T0 291 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 ATF7IP2Q5U623 682 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 TAS1R2Q8TE23 839 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 SEMA4DQ92854 862 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 SECISBP2LQ93073 1101 aaKnown RBP31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 CGRRF1Q99675 332 aa31.49■■■□□ 2.63
CTDNEP1-208ENST00000573600 ABLIM1O14639 778 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZEB2O60315 1214 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 MFAP3P55082 362 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 BRSK2Q8IWQ3 736 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 NAPGQ99747 312 aaPredicted RBP31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 PDE11AQ9HCR9 933 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 PTPRHQ9HD43 1115 aa31.48■■■□□ 2.63
CTDNEP1-208ENST00000573600 NRCAMQ92823 1304 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 SLU7O95391 586 aaKnown RBP31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 HARSP12081 509 aaKnown RBP31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 PSMC4P43686 418 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 AP3M2P53677 418 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 TUBB2AQ13885 445 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 SURF1Q15526 300 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZACNQ401N2 412 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZBTB33Q86T24 672 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZNF516Q92618 1163 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 TUBB2BQ9BVA1 445 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 TNFSF13BQ9Y275 285 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 ATP8B3O60423 1300 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 CNTNAP2Q9UHC6 1331 aa31.47■■■□□ 2.63
CTDNEP1-208ENST00000573600 A0A087WZ62 844 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 DYNC1I1O14576 645 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 CTIFO43310 598 aaKnown RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 FAM189A1O60320 539 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 AKR1A1P14550 325 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 LACTBP83111 547 aaPredicted RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 KIF22Q14807 665 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 TMEM132AQ24JP5 1023 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZBTB41Q5SVQ8 909 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZNF668Q96K58 619 aaPredicted RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 FDXACB1Q9BRP7 624 aaPredicted RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 FOXN3O00409 490 aaPredicted RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 LRRN2O75325 713 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 C4BPAP04003 597 aaKnown RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 PNMA6AP0CW24 399 aaPredicted RBP31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 CDC42EP1Q00587 391 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 KIAA0753Q2KHM9 967 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 ZNF410Q86VK4 478 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 PPM1KQ8N3J5 372 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 KAT2BQ92831 832 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 MINDY3Q9H8M7 445 aa31.46■■■□□ 2.63
CTDNEP1-208ENST00000573600 MFSD10Q14728 455 aa31.45■■■□□ 2.63
CTDNEP1-208ENST00000573600 NAB2Q15742 525 aa31.45■■■□□ 2.63
CTDNEP1-208ENST00000573600 VTNP04004 478 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 SMIM10L2AP0DMW4 78 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 SMIM10L2BP0DMW5 78 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 ZNF568Q3ZCX4 644 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 MFSD14CQ5VZR4 134 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 ENOSF1Q7L5Y1 443 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 RNF10Q8N5U6 811 aaKnown RBP31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 LMBR1Q8WVP7 490 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 SETD4Q9NVD3 440 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 NAGPAQ9UK23 515 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 CPSF3Q9UKF6 684 aaKnown RBP31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 DUSP10Q9Y6W6 482 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 MACROD2A1Z1Q3 448 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 WNT7BP56706 349 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 NFRKBQ6P4R8 1299 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 KIAA0319LQ8IZA0 1049 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 TRIM58Q8NG06 486 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 HELQQ8TDG4 1101 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 LENG1Q96BZ8 264 aaPredicted RBP31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 KATNAL1Q9BW62 490 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 MRFAP1Q9Y605 127 aa31.44■■■□□ 2.62
CTDNEP1-208ENST00000573600 HAS3O00219 553 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 TACC1O75410 805 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 PSEN2P49810 448 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 WDR44Q5JSH3 913 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 ALKBH5Q6P6C2 394 aaKnown RBP31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 SRGAP1Q7Z6B7 1085 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 WDR49Q8IV35 697 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 NLRP7Q8WX94 980 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 NENFQ9UMX5 172 aa31.43■■■□□ 2.62
CTDNEP1-208ENST00000573600 B4GALT5O43286 388 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 GCNT1Q02742 428 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 BIRC3Q13489 604 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 DEFB115Q30KQ5 88 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 TDRD10Q5VZ19 366 aaKnown RBP31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 LMBRD2Q68DH5 695 aaPredicted RBP31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 SHC3Q92529 594 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 ERO1AQ96HE7 468 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 KREMEN1Q96MU8 473 aa31.42■■■□□ 2.62
CTDNEP1-208ENST00000573600 DUSP11O75319 330 aaKnown RBP31.41■■■□□ 2.62
CTDNEP1-208ENST00000573600 HLA-DRAP01903 254 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms