RNA–Protein interactions for RNA: ENST00000573521.1

PCDHGA9-201, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA9, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-201ENST00000573521 GJB4Q9NTQ9 266 aa13.11□□□□□ -0.31
PCDHGA9-201ENST00000573521 RICTORQ6R327 1708 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 APOA4P06727 396 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 MARK3P27448 753 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 NLRP11P59045 1033 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 OCRLQ01968 901 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 KPNB1Q14974 876 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 HLFQ16534 295 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 FOXR2Q6PJQ5 311 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 EFL1Q7Z2Z2 1120 aaKnown RBP13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 FGD4Q96M96 766 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 CRAMP1Q96RY5 1269 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 SENP7Q9BQF6 1050 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 ANKEF1Q9NU02 776 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 MTMR4Q9NYA4 1195 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 PAK5Q9P286 719 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF212Q9UDV6 495 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 L3MBTL1Q9Y468 752 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 PREX1Q8TCU6 1659 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 EMSYQ7Z589 1322 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 SRGAP2CP0DJJ0 459 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 GYS2P54840 703 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 MTF1Q14872 753 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 SLC27A3Q5K4L6 730 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF662Q6ZS27 426 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 C16orf86Q6ZW13 317 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 PBXIP1Q96AQ6 731 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZNF560Q96MR9 790 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 CNPY3Q9BT09 278 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 CTDNEP1O95476 244 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 PRDX5P30044 214 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 DYNLT1P63172 113 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 EFTUD2Q15029 972 aaKnown RBP eCLIP13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 TMEM270Q6UE05 265 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 C16orf89Q6UX73 402 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 C11orf70Q9BRQ4 267 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 ADGRB1O14514 1584 aa13.1□□□□□ -0.31
PCDHGA9-201ENST00000573521 FAM237AA0A1B0GTK4 181 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 F5H6K3 240 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 GOLGA8TH3BQL2 631 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 GAS2O43903 313 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 IL10P22301 178 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 KLRC3Q07444 240 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 SF3A3Q12874 501 aaKnown RBP eCLIP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 TRIP13Q15645 432 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 DPY19L2Q6NUT2 758 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 HHIPL2Q6UWX4 724 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 SLC35G2Q8TBE7 412 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 LXNQ9BS40 222 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 WHRNQ9P202 907 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 RIMS1Q86UR5 1692 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 PIK3C2BO00750 1634 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 C16orf96A6NNT2 1141 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 H2AFYO75367 372 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 CHN1P15882 459 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 PGM1P36871 562 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 SERPINB10P48595 397 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 GUCY1A3Q02108 690 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 MED21Q13503 144 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 MAML3Q96JK9 1138 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 CCDC134Q9H6E4 229 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NGRNQ9NPE2 291 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 KLHL8Q9P2G9 620 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 FHOD1Q9Y613 1164 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NCK2O43639 380 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NAA30Q147X3 362 aaPredicted RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NCAPHQ15003 741 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 KLHDC7AQ5VTJ3 777 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 ARHGEF26Q96DR7 871 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 TSPAN17Q96FV3 270 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZIM3Q96PE6 472 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 TMEM8AQ9HCN3 771 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 BLOC1S6Q9UL45 172 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 PSTPIP1O43586 416 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 RARGP13631 454 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 KCNQ4P56696 695 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 PSMC1P62191 440 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NOP14P78316 857 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 HDLBPQ00341 1268 aaKnown RBP13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 INPP5AQ14642 412 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 XKR3Q5GH77 459 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 ZBED8Q8IZ13 594 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 FAM161BQ96MY7 647 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 HINFPQ9BQA5 517 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 NAT9Q9BTE0 207 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 RSAD1Q9HA92 442 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 KBTBD4Q9NVX7 518 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 AIPL1Q9NZN9 384 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 HPS5Q9UPZ3 1129 aa13.09□□□□□ -0.31
PCDHGA9-201ENST00000573521 FOXN1O15353 648 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 STIP1P31948 543 aaKnown RBP13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 RFC5P40937 340 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 MAP3K10Q02779 954 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 NKX1-1Q15270 411 aaPredicted RBP13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 PTPN21Q16825 1174 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 EFHC2Q5JST6 749 aa13.08□□□□□ -0.31
PCDHGA9-201ENST00000573521 PAGR1Q9BTK6 254 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms